KEGG   Serratia fonticola DSM 4576: WN53_11365
Entry
WN53_11365        CDS       T04030                                 
Name
(GenBank) RNA ligase
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
sfw  Serratia fonticola DSM 4576
Brite
KEGG Orthology (KO) [BR:sfw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sfw03016]
    WN53_11365
Enzymes [BR:sfw01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     WN53_11365
Transfer RNA biogenesis [BR:sfw03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    WN53_11365
 Prokaryotic type
   tRNA splicing ligases
    WN53_11365
SSDB
Motif
Pfam: RtcB DUF4514
Other DBs
NCBI-ProteinID: AKG69656
UniProt: A0A0F7HB96
Position
2552199..2553434
AA seq 411 aa
MTYTKNNNYELMAPVNSAPIKMWTQGVPVEPEAREQLLNTAKMPFVFKHLAVMPDVHLGK
GSTIGSVIPTRGAIIPAAVGVDIGCGMIAVRTSLVAADLPDSLAGLRSAIEQAVPHGRSS
TRSKRDKGSWTTPPQTVDRHWAELAPRFNRLIDKYPRLRNTNNYQHLGTLGTGNHFIEVC
LDETQQVWVMLHSGSRGVGNAIGSLFIALAQQDMQQHIANLPDRNLAYFEEGSQHFDDYM
EAVGWAQDFARHNREVMMEHVLAALSRIVTKPFTTQQEAVNCHHNYVQRETHFGEPVLVT
RKGAVSAQKGQMGIIPGSMGAKSFIVRGLGNEESFCSCSHGAGRTMSRTAAKKRFTVADQ
IRATEHVECRKDSEVIDEIPMAYKDIDAVMAAQSSLVEIVHTLRQVVCVKG
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgacttacacaaaaaacaataactatgaattgatggcaccggttaacagcgcaccaatc
aaaatgtggacacagggcgtgcccgttgagccagaagcgcgtgagcagttgctgaatacg
gcaaaaatgccgtttgtttttaaacacctggcggtgatgccggatgtgcatttgggtaaa
ggttccaccattggtagcgtgatccctacccgtggcgcgattatcccggcggccgtaggc
gtggatattggttgcggcatgattgcggtgcgtacttcgctggtggccgccgatctgccg
gatagcctggctgggttgcgtagcgccatcgaacaggcggtgccgcatgggcgtagctca
acccgttcgaaaagagataaaggaagttggaccactccgccgcaaaccgtcgatcgccac
tgggccgagctggctccgcgctttaaccgcctgatcgataaatacccgcggttgcgtaac
accaacaactaccagcatctgggaacgttgggaacgggtaaccactttatcgaggtctgc
ctggatgaaacgcagcaggtgtgggtgatgctgcatagcggttcccgtggcgtggggaat
gccatcggttcgctgtttattgctctggcgcagcaggatatgcaacagcatatcgctaac
ctgccggatcgtaatctggcctatttcgaggaaggtagccagcattttgacgattacatg
gaagccgtgggttgggcgcaggactttgcccgtcataaccgggaagtgatgatggagcac
gtgctggcggcgttgtcgcgtatcgtgaccaaaccgttcaccacccagcaagaggccgtg
aactgccaccataactatgtgcaacgtgagacgcactttggtgagccggtgttggtgacg
cgtaaaggggccgtgtctgcgcagaaagggcagatggggatcatccccggttcgatgggg
gcgaaaagcttcatcgtgcgcggattgggtaacgaagagagcttctgctcttgcagccat
ggagcaggccgcaccatgagccgtacggcggcgaaaaaacgcttcaccgtggccgaccag
atccgggctaccgaacatgtggaatgccgtaaggacagcgaggtgatcgatgagatccca
atggcttataaagatatcgatgcggtgatggcggcacagtcctcactggtggaaatcgtc
cataccctgcggcaggtggtatgcgtaaaaggataa

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