KEGG   Serratia fonticola DSM 4576: WN53_14825
Entry
WN53_14825        CDS       T04030                                 
Name
(GenBank) hypothetical protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
sfw  Serratia fonticola DSM 4576
Pathway
sfw03420  Nucleotide excision repair
sfw03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sfw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    WN53_14825
   03430 Mismatch repair
    WN53_14825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfw03400]
    WN53_14825
Enzymes [BR:sfw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     WN53_14825
DNA repair and recombination proteins [BR:sfw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     WN53_14825
   MMR (mismatch excision repair)
    Other MMR factors
     WN53_14825
SSDB
Motif
Pfam: UvrD-helicase AAA_19
Other DBs
NCBI-ProteinID: AKG70278
UniProt: A0A0F7HBS1
Position
complement(3347489..3349411)
AA seq 640 aa
MSAVHLSPDDLVELTTLARDLNFDDAERRSALLENGSRDFNAVPGSGKTSLLAAKLLLLA
RKWPHARRGICVLSHTNVARDEIAHRLAGTVEGTQLLSYPHFIGTIHSFVNHFFAMPLLR
SLGMKIDVIDDQVFADKARSLLLTRKFSSLRFYLEKQMNGEGIATTLFYRTAELGVHVES
GSLPASHTKSYNSLIELKNMLACQGVFRHRDMFAFADLALQTCPRLLDVVHRRFPMVFID
EMQDTSWEQESLLNRIFDGRSVMQRFGDIDQKILSDEEQAELLTFPRAGYGCISTSKRFG
KSISDAVGCVRVSGEAVVGEGENSNAPVLLLYKTESAIKVVEHFGRIVIDRLSEDNIGLR
EVKAMSARKTGESNVDAGRHLLDYCPTYGGDKLSAGIRSESFWSLIGDSKGALKETSLSS
RVSDVRRALLIILRASGASWAQDIRDARALSRAAKAVTPTGTIDKLTRQLALYGEELCTD
GQRDALTELLYTQLKPYLPEEISLEIFKGLSTFEDAGERGRLNTSASARCEISFQGRSLD
IGLGTVAGMKGETHAASLILESYGGFSRKFDVALGLEYIAGTAAKKISKLPKTQQAQMRN
LYVAMSRPAKLLCLAANESRVSQTLRDALVLKGWHIEYVT
NT seq 1923 nt   +upstreamnt  +downstreamnt
atgagtgctgtccatctctctccagacgacttagtcgaactgacgacgctagccagagac
ctgaactttgacgatgctgaacgtcgttctgccctacttgaaaacggatcgcgtgatttt
aatgcagtacccggaagtgggaagacatcgctgcttgcagcaaaacttttgttgctggct
aggaaatggcctcatgcacgccgaggcatatgtgttctaagtcacactaacgttgctcgc
gatgagattgcacatcgcctggcgggaacagttgaaggaacccagcttctgagctacccc
catttcattggtactatccatagcttcgtcaatcatttctttgcaatgcccttactacgt
agcctaggaatgaagattgatgtcattgatgatcaggtgttcgcggacaaagctcgctcc
ctacttctgacgaggaaattttcaagccttcgcttttatctggagaaacagatgaatggt
gaaggtattgctactacgctcttctatcgcacggcagagcttggagtgcatgttgaaagc
ggcagcctacccgcatcgcacaccaaatcatacaattcattgatagaactaaaaaacatg
ctggcgtgtcaaggtgtttttcggcatcgtgacatgtttgcatttgctgaccttgcgctt
cagacctgcccgaggcttcttgatgttgtccatcgtcgcttcccgatggtgttcatcgac
gaaatgcaggatacctcctgggagcaagagtccttgttaaatcgtattttcgatggccgg
tcagtgatgcagcgttttggggatatcgatcagaagattctctctgatgaagaacaagct
gaattactcacattcccacgggctgggtatggatgtataagcaccagcaaacggttcggt
aaatcaatttccgatgctgtagggtgtgtccgtgtcagtggcgaggctgttgttggtgag
ggcgaaaattctaatgccccagttctattactgtacaaaacggagagtgctatcaaagtg
gtcgaacactttggtcgaattgttatcgacagactgagtgaggacaacatcggtttgcgc
gaagttaaggcgatgagcgctcgcaaaaccggtgagagcaacgttgacgcaggtcgtcat
ctccttgattactgtccaacctatggcggagacaagcttagtgcaggaatacgctcagaa
agtttctggagtctcatcggtgacagtaaaggggctttgaaagaaacatctttgagttca
agagtttcagacgttcgcagagcgttattgattattctgcgtgcatctggggcatcgtgg
gcgcaagacattcgtgatgcacgagcgctttcacgagctgcgaaggctgttacacccact
ggaacaattgataagttaacacggcagcttgcattgtacggagaggaactttgtacagat
ggtcagcgagatgcactgacagaactgctctacacgcaacttaagccataccttcccgaa
gagataagccttgaaatatttaagggactgagcactttcgaagacgcaggcgagaggggg
agactaaacacttctgcctcggcgagatgtgaaattagttttcaggggagaagcctcgac
attggactcggtacggttgcagggatgaaaggcgaaactcacgccgcatctttaatcctt
gaatcctacggtgggttcagtcgtaagttcgatgttgcactggggctagagtatattgca
ggaacagcggcaaaaaaaatttcaaagcttcctaaaactcaacaggcgcaaatgcgcaac
ctttacgtagcaatgtctcgaccagcgaaattgttatgtcttgcagcgaacgaaagccga
gtttcgcagactttgcgtgatgcgctggtacttaaaggatggcatatagaatatgtgact
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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