KEGG   Shigella flexneri 2457T (serotype 2a): S1170
Entry
S1170             CDS       T00128                                 
Symbol
yceC
Name
(GenBank) hypothetical protein
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
sfx  Shigella flexneri 2457T (serotype 2a)
Brite
KEGG Orthology (KO) [BR:sfx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sfx03009]
    S1170 (yceC)
Enzymes [BR:sfx01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     S1170 (yceC)
Ribosome biogenesis [BR:sfx03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    S1170 (yceC)
SSDB
Motif
Pfam: PseudoU_synth_2 S4 DUF3603
Other DBs
NCBI-ProteinID: AAP16597
UniProt: P0AA40
Position
1135549..1136508
AA seq 319 aa
MKTETPSVKIVAITADEAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRIKPEYKL
EAGDEVRIPPVRVAEREEEAVSPHLQKVAALADVILYEDDHILVLNKPSGTAVHGGSGLS
FGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALV
RGQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERYAFATLVRCSPVTGR
THQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTGLNRLFLHAAALKFTHPGTGEVMRI
EAPMDEGLKRCLQKLRNAR
NT seq 960 nt   +upstreamnt  +downstreamnt
atgaaaacagagactccatccgtaaaaattgttgctatcaccgctgacgaagcggggcaa
cgtatcgataactttttgcgtacccaattgaaaggcgtaccaaaaagtatgatttaccgt
attttgcgtaaaggtgaagtgcgggtgaacaaaaaacgtattaagcctgaatataaactc
gaagcgggtgatgaggtgcgtatcccaccggttcgcgttgctgagcgggaagaagaggcg
gtttcgccacatctgcaaaaggtggcggcgctggcggacgtcatcttatatgaagatgat
catatcctggtgctgaataaaccttccggtacggcggtacatggcggcagtggtttaagc
ttcggcgttatcgaaggtttgcgggcgttgcgcccggaagcgcggttccttgaactggtt
catcgtctcgaccgggacacttcaggtgtgttgctggtagcgaaaaaacgctcggcgttg
cgttctctgcatgagcaattacgtgaaaaaggaatgcaaaaagattacctggcgctggtg
cgcggtcagtggcagtcgcatgtgaagagcgttcaagcgccgttattgaaaaatattctg
caaagcggcgaacgtatcgtgcgtgtcagtcaggaaggcaaaccgtcggaaacacgcttt
aaagtggaagaacgctatgcatttgccaccctggtgcgttgtagcccggtaaccggacgt
actcatcagatccgtgtgcatacacagtatgcgggtcatccgattgcctttgacgatcgc
tacggtgaccgtgaatttgacagacagctcactgaagcaggcacgggattaaatcgtctg
ttcctgcacgccgcagcgttgaagtttacccatccggggaccggtgaggtgatgcgtatc
gaagcgccgatggatgaaggtttgaagcgttgtttgcaaaagctgcgtaacgcgcgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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