KEGG   Shigella flexneri 2457T (serotype 2a): S3141
Entry
S3141             CDS       T00128                                 
Symbol
yggJ
Name
(GenBank) hypothetical protein
  KO
K09761  16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
Organism
sfx  Shigella flexneri 2457T (serotype 2a)
Brite
KEGG Orthology (KO) [BR:sfx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sfx03009]
    S3141 (yggJ)
Enzymes [BR:sfx01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.193  16S rRNA (uracil1498-N3)-methyltransferase
     S3141 (yggJ)
Ribosome biogenesis [BR:sfx03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    S3141 (yggJ)
SSDB
Motif
Pfam: Methyltrans_RNA PUA_4
Other DBs
NCBI-ProteinID: AAP18243
UniProt: P0AGL9
Position
3021626..3022357
AA seq 243 aa
MRIPRIYHPEPLTSHSHIALCEDAANHIGRVLRMGPGQALQLFDGSNQVFDAEITSASKK
SVEVKVLEGQIDDRESPLHIHLGQVMSRGEKMEFTIQKSIELGVSLITPLFSERCGVKLD
SERLNKKLQQWQKIAIAACEQCGRNRVPEIRPAMDLEAWCAEQDEGLKLNLHPRASNSIN
TLPLPVERVRLLIGPEGGLSADEIAMTARYQFTDILLGPRVLRTETTALTAITALQVRFG
DLG
NT seq 732 nt   +upstreamnt  +downstreamnt
atgcgtatcccccgcatttatcatcctgaaccactgaccagccattctcacatcgcgctt
tgcgaagatgccgccaaccatatcgggcgcgtactgcgcatggggccggggcaggcgttg
caattgtttgacggtagcaaccaggtctttgacgccgaaattaccagcgccagcaaaaaa
agcgtggaagtgaaggtgctggaaggccagatcgacgatcgcgaatctccgctgcatatt
cacctcggtcaggtgatgtcgcgtggtgaaaaaatggaatttactatccagaaatcgatc
gaactcggtgtaagcctcattacgccacttttttctgagcgctgcggcgttaaactggat
agtgaacgtctgaacaagaagcttcagcagtggcagaagattgcaattgctgcctgtgag
cagtgtggtcgtaaccgggtgccggaaatccgtccagcgatggatctggaagcctggtgt
gcagagcaggatgaaggactgaaactgaatcttcacccgcgcgccagtaacagcatcaat
acgttgcctttaccggttgaacgcgtccgcctgctgattggcccggaaggcggtttatcg
gcagatgaaattgccatgactgcccgctatcaatttactgatatcctgttgggacctcgc
gttttgcgtacagagacaactgcgctcaccgccattaccgcgctacaagtacgatttggc
gatttgggctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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