KEGG   Sinocyclocheilus grahami (golden-line barbel): 107559134
Entry
107559134         CDS       T04918                                 
Name
(RefSeq) 5'-3' exoribonuclease 2-like isoform X1
  KO
K12619  5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03008  Ribosome biogenesis in eukaryotes
sgh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    107559134
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107559134
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sgh03021]
    107559134
   03019 Messenger RNA biogenesis [BR:sgh03019]
    107559134
   03009 Ribosome biogenesis [BR:sgh03009]
    107559134
   03016 Transfer RNA biogenesis [BR:sgh03016]
    107559134
Transcription machinery [BR:sgh03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     107559134
Messenger RNA biogenesis [BR:sgh03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     107559134
Ribosome biogenesis [BR:sgh03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    107559134
Transfer RNA biogenesis [BR:sgh03016]
 Eukaryotic type
  tRNA degradation factors
   Rapid tRNA decay (RTD) pathway factors
    107559134
SSDB
Motif
Pfam: XRN_M XRN_N
Other DBs
NCBI-GeneID: 107559134
NCBI-ProteinID: XP_016098355
UniProt: A0A672JXN5
Position
Unknown
AA seq 958 aa
MGVPAFFRWLSRKYPSIIVHCLEEKAKEYNGFKIPVDTSKPNPNEVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRFR
ASKEGAELTEEKSKMREEVIQRGGYLPPEEIKEHFDSNCITPGTEFMDNLAKCLRYYIAD
RLTNDPGWHNITVFLSDASVPGEGEHKIMDFIRRQRAQPNHDPNTHHCHCGADADLIMLG
LATHEANFTIIREEFKPNKPRPCALCGQMGHEIKDCQGLAREKQGEHDEFADTVPVSEQE
FIFIRLAVLREYLEKELTMASLPFPFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVGIYKDVVHKTGGYLTENGFVNLERVELIMQAVGVAEDNIFKKRKDDDESFKRRMKE
KKKRMKAEQGPSFVPGGQFAPQALGGRDRPMAVQNARQTAYEMRMKGNQRNQEAAQSLRA
MMRNGKSPAGGSDDVDSRGVKRKAEDSDSEPEPEDNVRLWEEGWKQRYYKTKFDVDATDD
EFRKKVVQSYVEGLCWVLRYYYQGCASWKWYFPFHYAPFASDFKDIKGMFSDFEKGTKPF
KPLEQLMGVFPAASGNFLPQIWRALMTDPLSSIIDFYPDDFAIDLNGKKYAWQGVALLPF
VDERRLREALADVYPDLSPEEVRRNSLGSDVIFVGKSHPLCDFIRELYRAESHEDTEIPA
ELCHGIQGILNLDEDPILPDKPVESPIPTLRDISSNCAIGIKFKDPQYDDGFVFKAVVLP
GAKIPNKVLKPGDWERSNRGPWRPQLGFNPNRQQAHLDQSAFRKLNHYVDRNQGTGLFGS
GPPFEAQHRGGQYSNAPPPRNYHQGNYHPPQRDHYPQNQYSRPPPVNANAAYPRFQHGAH
GWDRAMQSQSTAYQQNQERGRGGWRPPHNQQDSRGGGHQQGFGQGYGLPPPSQRYNWN
NT seq 2877 nt   +upstreamnt  +downstreamnt
atgggagtccccgcgtttttccgctggttgagtcggaagtatccgtcaataatagtacac
tgtctggaggagaaggccaaggagtacaatggctttaaaatcccggttgatacaagcaaa
cccaatccaaatgaagtggagtttgacaacctgtatctagacatgaatggaattattcac
ccgtgcacacatccggaggacaagccggcacctaaaaatgaagatgaaatgatggttgcc
attttcgaatatattgaccgtctctttaacattgttcggcctagacgggttctgtacatg
gcaattgatggtgtggctcctcgtgccaaaatgaaccagcagcgctcgagacgattccgg
gcatctaaagaaggagcggagcttacagaggagaaaagcaaaatgagagaagaagttatt
caaagaggtggttacctgccacctgaggaaataaaagaacattttgacagtaactgtatc
acccctgggactgagttcatggataatttggccaaatgtttgcgatattacattgcagac
agactgaccaatgaccctggatggcacaatatcacagttttcttgtcagatgccagtgtt
cccggagaaggagagcataaaattatggatttcatcaggagacagagagctcagccaaat
catgacccaaacacacatcactgtcattgtggagctgatgctgatttgatcatgttgggt
ttggcgacacatgaagccaactttaccattataagagaagagttcaaacccaataaaccc
agaccttgcgccctgtgtggacagatgggccacgagatcaaagactgtcagggactggcc
cgagaaaaacagggcgagcatgatgaatttgcagacacagttccagtatcagaacaggag
ttcatattcatccgactggctgtgttacgagagtatctagagaaggagttaacaatggcc
agcctgccgttcccatttgacttcgagcggagtgtcgacgactgggtgttcatgtgtttc
tttgtgggaaacgacttcttgccccacttaccgtctcttgagatcagagagggcgccatt
gatcgtctggttggcatctacaaagatgttgtgcataagaccgggggctacttaacagaa
aacggctttgtcaatctcgagcgagtcgagctcattatgcaagccgtaggggtggcggag
gacaacatcttcaaaaagcgcaaagatgatgatgagagttttaaacggagaatgaaggaa
aagaagaaacggatgaaagcggagcagggtccatcgtttgtccctggtggtcagtttgcc
cctcaggctctgggtggcagagaccgacccatggcggtgcagaacgccagacaaactgca
tatgaaatgaggatgaagggaaatcagcgcaatcaggaagcagctcagtccttgagagcc
atgatgagaaatggaaagagtcctgctggaggcagtgacgatgtggatagtcgtggtgtg
aaacgtaaagcagaggacagtgacagtgaaccggaaccagaagataacgtcaggttatgg
gaggagggctggaaacagcgttactacaaaaccaaatttgatgtggacgcgacggatgat
gagtttcgtaagaaagtggtgcagtcgtacgtggagggcctgtgctgggtgctcaggtac
tactatcagggctgtgcgtcctggaagtggtattttccctttcattatgctccgtttgcc
tccgacttcaaagacatcaagggcatgttcagtgatttcgagaaagggaccaaaccgttc
aaacctctggagcagctcatgggtgtatttcctgctgccagtggaaactttctgccacaa
atatggagagcccttatgacagacccactatcctcaatcattgatttctaccctgatgac
tttgccattgatttgaatgggaagaagtacgcctggcagggtgttgctttgttgccgttt
gtcgatgagcggaggttacgagaagcattagcagacgtctaccctgatttgtccccagag
gaggtaagaaggaacagtctcggaagtgatgtcatatttgtggggaagtcccaccccctt
tgtgatttcatccgggagctctaccgtgcagaatctcatgaggacactgagatccctgca
gaactttgccatggaatccaaggtatattaaatctagatgaagaccctattctaccagat
aaaccagtggagtcgccgatcccaacactgagagacatcagcagcaactgtgctattgga
atcaaattcaaggatccgcagtatgatgatgggtttgtgttcaaggctgttgtcctacca
ggggcgaagatccctaacaaggttctaaaaccgggtgattgggagcggagtaaccgcggc
ccatggagacctcaactgggatttaacccaaaccgccaacaagcccatttggaccaatcg
gctttcagaaagctcaatcactatgtggacagaaatcaagggacaggtctgtttggctct
ggcccacctttcgaggctcagcataggggtggtcagtacagcaatgccccgccccccaga
aactatcaccaaggaaactaccatccaccccaaagagaccattaccctcaaaaccaatat
tccagaccacctccagtgaacgccaacgccgcgtatcccagattccagcatggagctcac
ggttgggatcgggctatgcagtcccagagcactgcgtaccagcagaaccaggagagagga
cgaggaggatggagaccccctcacaaccagcaggacagccgcgggggaggacatcagcag
gggtttgggcagggttatgggttacctccaccgtcacaacgctacaactggaactga

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