KEGG   Sinocyclocheilus grahami (golden-line barbel): 107563689
Entry
107563689         CDS       T04918                                 
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
  KO
K08268  hypoxia-inducible factor 1 alpha
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04137  Mitophagy - animal
sgh04140  Autophagy - animal
sgh04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    107563689
   04137 Mitophagy - animal
    107563689
   04148 Efferocytosis
    107563689
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sgh03000]
    107563689
Transcription factors [BR:sgh03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    107563689
SSDB
Motif
Pfam: PAS_11 PAS_3 HIF-1a_CTAD HIF-1 PAS PAS_9 PAS_4 HLH Cas_Csn2
Other DBs
NCBI-GeneID: 107563689
NCBI-ProteinID: XP_016104113
UniProt: A0A672Q1D8
Position
Unknown
AA seq 770 aa
MDTGVVTEKKRVSSERRKEKSRDAARSRRGKESEVFYELAHQLPLPHNVTSHLDKASIMR
LAISYLRMRKLLSSDDEEKENEMECQLNSFYLKALEGFLMVLSEDGDMVYLSENVSKSMG
LTQFDLTGHSIFEFSHPCDHEELREMLVHKTGSKKTKEQNTERSFFLRMKCTLTSRGRTV
NTKSATWKVLHCAGHVRVQERGEGSGDSGFKEPPLTYLVLICEPIPHPSNIEVPLDSKTF
LSRHTLDMKFSYCDERITELMGYEPDDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQATT
GQYRMLARKGGFVWVETQATVIYNPKNSQPQCIVCVNYVLSGIVEGDVVLSLQQTVTEPE
AEEKENQEMEDEASEVDILKLFKPESLKCPVESSDLYEKLKEEPEALTVLAPAAGDTIIS
LDFNNSDSDMQLLKEVPLYNDVMLPSSSEKLPISLSPLTPIDSTPVLNKLETGVEVFTFS
SASDSTNTPSTSGLCSSGPNSPMDYCFQVDSDISSEFKLDLVEKLFAIDTEAKTPFSSQA
MEDLDLEMLAPYIPMDDDFQLRIPSPLDPLPSGPHSVSAMSSLFQPLPSPASPVSSSSSV
VKQGPSSQAPSPLHLLQEVCSAPVSPFSGSRDVSPARSPAPQSSNQLNNRELSPKMLAIQ
NAQRKRKLEEVTSLCEAVGLGALLQSVNSAVEPGKRAKVLEVKGSSVLGGNKTILILPSD
VASRLLCSSSEGSSGLPQLTRYDCEVNAPVQDRHHLLQGEELLRALDQVN
NT seq 2313 nt   +upstreamnt  +downstreamnt
atggatactggagttgtcactgaaaagaaaagggtgagctcggagcgcaggaaggagaag
tccagggatgcggcacgatctcgcaggggaaaggagtccgaggtgttctacgagttagca
caccagctccccctgccacacaatgtcacctcccacctggacaaagcctccatcatgagg
ctggccatcagctacctgcgcatgaggaagctactgagctctgatgatgaagagaaggag
aatgaaatggagtgtcagctgaacagcttttatctgaaggccctggagggtttcctcatg
gtcctgtctgaagatggagacatggtttatctctctgagaatgtcagcaagagcatgggc
ctcacacagtttgatctgactggtcacagcatctttgaattttcacacccatgtgaccat
gaggagctgagagagatgctggtccataagaccggatccaaaaagaccaaggaacaaaat
acagagcgcagcttcttcctgcgtatgaagtgcacactcactagcagagggcggactgtc
aataccaagtctgctacgtggaaggttcttcactgcgctggtcatgtccgtgtgcaggag
cgcggtgagggttcgggagactctggctttaaagagcctcctctgacctaccttgtgctc
atctgtgagcccattcctcatccctcgaatatcgaggtgcctctggacagcaagaccttt
cttagtcgccacactctggacatgaagttctcgtactgtgatgaaaggatcacagagctg
atgggatatgagccggatgatcttctgaacaggtctgtgtacgaatactatcatgccctg
gattcagatcacctcaccaagacacatcacaacttgttcgccaagggccaggccaccaca
ggccagtaccgcatgctggccaggaaaggtggttttgtgtgggtggagactcaggccacc
gttatctacaaccccaagaattctcagccgcagtgcattgtgtgcgtcaactacgttctc
agtggcattgtggagggggatgttgtcctgtccttgcagcagactgtgacagagcccgag
gccgaggagaaagagaaccaggagatggaagatgaagcctctgaggtggacatactcaaa
ctcttcaagccagaaagcctcaagtgtcccgtggagagctctgatctttatgagaagctg
aaagaggagcctgaggctcttactgtgttggcgcctgctgcaggagacaccataatttct
ctggacttcaacaactcagattctgacatgcagctgctgaaggaggtgcccctctacaat
gatgtcatgctgccctccagcagcgagaagctgcccatcagtctgtctcctctgacaccc
attgactccaccccagttctgaacaaactagagaccggagtggaggtcttcactttcagc
tctgcctcagactccacaaacacaccttccacatctggactgtgctcctctgggcccaac
agccccatggattactgtttccaagtagactcagacatcagttctgaattcaaactggac
ctggttgagaaactgtttgctattgataccgaggcaaagaccccttttagctcccaggcc
atggaggatctcgacctagagatgctggctccgtacatcccaatggatgatgacttccag
ctgcgtatcccctctccgctggatccgctcccctctggccctcactctgtgtcagccatg
agctccctgttccagcccttaccctcccctgcgtctccagtctcttcctccagcagcgta
gtgaagcaggggccatcatcacaggccccttcaccgctgcacctgctacaggaggtgtgc
agtgcccctgtctcacccttcagtggcagtcgggatgtttcccctgctcggtcccccgcc
ccacagagcagcaatcagctcaacaacagagagctgtctccaaagatgttagccatccag
aatgcccaacgtaagaggaagttggaggaagtgacatcactttgtgaggctgttggactg
ggtgctttgcttcagagtgtgaacagtgctgtagagcctggaaagagggcaaaggtttta
gaggttaaaggatcgagtgtgctcggaggaaataaaaccattctcatactgccctctgat
gtggccagtcgcctgttgtgcagttcttcagagggcagcagcgggctgcctcagctaaca
cgttatgactgcgaagtcaacgctcccgtgcaggaccgccatcatctgctgcagggagag
gagctcctgcgtgctctggaccaagtcaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (9)   
   Pfam (9)   
All databases (24)   

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