KEGG   Sinocyclocheilus grahami (golden-line barbel): 107565304
Entry
107565304         CDS       T04918                                 
Name
(RefSeq) DNA repair protein XRCC1-like
  KO
K10803  DNA-repair protein XRCC1
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    107565304
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sgh03400]
    107565304
DNA repair and recombination proteins [BR:sgh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     107565304
SSDB
Motif
Pfam: XRCC1_N BRCT_2 BRCT LIG3_BRCT AP3D1 F5_F8_type_C
Other DBs
NCBI-GeneID: 107565304
NCBI-ProteinID: XP_016106011
Position
Unknown
AA seq 420 aa
MPEIKLKHVVSCSSEDSTHKADNLLSSDTYRKWKAARPGEKQVSVILQLEKEEQIHSIDI
GNEGSAFIEVLVGHSTSVKDQDFQVLLVTSSFMSPTESRNGTNTNRVRLFGPSQLVKAMA
QEKWDCVKIVCSQPYSKSIAYGVAFIKLHSPPDANDVPVSTPPVSAAPPASRCLTAWNRH
QSRQTYFSSWTPCSDIPIQFQLNSISVSRCFSRYLMNGAESSSESEAEEDESEEETQKAK
TPEKRQTTPKKQPIKEEEEEEEYGGSTDAEDPADDGSGMDTEDELNRVEMESRRKKAAKE
SAAVQVKDEDLYGGSTDENTDAEEEEDKPIPELPDFLTGKRFYLYGKFPDNQKRQLQRYI
IAFNGAVEDYMSEKVQFVVTSEGWDESFEDFPFAVMVVLLCSRASFTSPKRHIRSLEQSS
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgcctgaaatcaaactcaagcatgtcgtgtcatgcagcagtgaggacagcactcacaaa
gcagataatctcctgagctccgacacgtataggaaatggaaagctgcgagacctggagag
aagcaagtttcagtcattcttcagctggaaaaggaagagcaaattcacagcatagacatt
ggaaatgaaggctctgctttcattgaggtccttgttggacactccacgtcagtcaaagac
caagactttcaggttctgctggtcacgtcgtctttcatgtcgcccacggaaagccgtaac
ggcacaaacacaaaccgcgtgcgtctcttcgggccgagccagctggtgaaggccatggca
caggagaagtgggactgtgtgaagatcgtgtgcagtcagccgtacagcaagtcaatagcg
tacggagttgccttcataaagctgcactctcctccggacgctaacgatgttcctgtctcg
actcctccggtgagtgctgcccctccggcgtcccgctgtttgacggcctggaatcgccat
caaagccgtcagacttatttcagctcctggactccatgttcagacattcccatccagttc
cagttaaactcaatctctgtttctcgttgtttttccaggtatctcatgaacggagccgag
tccagttcagagagtgaggcagaagaggatgagagcgaggaggagacgcagaaagcgaaa
acaccagaaaagaggcagacgaccccaaaaaagcagccgattaaggaagaggaggaggag
gaggagtacggaggttcaacagatgctgaagatccagcggatgacgggtctggcatggac
actgaagatgagctgaacagggtggaaatggagagcaggaggaagaaagcagcgaaggaa
agtgcagcggttcaggtgaaagatgaagatctgtacggcggctctactgatgagaacacg
gatgctgaggaagaggaggataaacccatccccgaactaccagacttcctaacaggaaaa
cgcttctatctttacggcaagttccctgacaaccagaagaggcaacttcaacgctacatc
atcgccttcaacggagctgtcgaagactacatgagcgagaaggtccagtttgtcgtcacc
agcgagggatgggacgaatcgtttgaggattttccatttgcagtcatggttgtcttgctc
tgcagtcgtgccagctttacctcgccgaagcgtcacattcgttcccttgagcaaagttct
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system