KEGG   Sinocyclocheilus grahami (golden-line barbel): 107575375
Entry
107575375         CDS       T04918                                 
Name
(RefSeq) collagen alpha-2(XI) chain-like
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107575375
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:sgh00536]
    107575375
Glycosaminoglycan binding proteins [BR:sgh00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   107575375
SSDB
Motif
Pfam: COLFI Collagen
Other DBs
NCBI-GeneID: 107575375
NCBI-ProteinID: XP_016117248
Position
Unknown
AA seq 1163 aa
EGKANNGKADKPKTAPAKAAPAKTKPTTKPKAKPISKTKPTLASKLASKPKVTPAPKIEN
KKKANDNGKNNGQAKVNGNGNGNGKSNGNGKDANGKAKAGSNGKANNNGNGKAAVEKKAK
GEAKANGNGAKTVKTEKAAVTKETVAKKSETTAKKAETRPQPAKDKTKANAVPKAKPKAT
KPVVEKFPTKVAKTPKPVAFKPTPAPLPLPPKPKVLDVNNFKSMSKTFPPFDKAAVSGTT
MSSPEIPKKKPTNGYQQVQNQEPALAFQSCISNLAILVVQDRVHKVDETVGAEEVDATKT
GGEGVSQTPDEPFIEEYITSDFGTKEYDYSYRDYNEPIIESKTEDTFGPALSAVTDEGGG
MLIEGPPGPEGPAGLPGSAGPQGPPGSVGDPGERGPRGPHGLSGPPGKSGRRGRAGADGA
RGMPGESGIKVGHLNPFCVCGEKGPTGKPGLPGMPGGDGPPGHPGKEGPTGTKGNQGPNG
PQGSIGYPGPRGIKGTQGIRGLKGHKGEKGEDGFPGIKGDFGVKGERGEVGVPGPRGEDG
PEGPKGRVGPLGEIGPIGLVGEKGKLGVPGLPGYPGRQGIKGSLGFPGFPGANGEKGARG
LIGKTGPRGQRGPTGPRGQRGPRGATGKSGAKGGSGSDGPSGPPGERGLTGLQGPNGFPG
PKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGPSGETGPMGERGHSGPPG
PPGEQGLSGPSGKEGTKGDPGPSGGPGKDGPPGLRGFPGERGLPGTSGTGGLKGNEGPAG
PPGSAGSPGERGAAGTAGTVGPPGRPGPQGPPGAAGEKGVPGEKGPIGPAGRDGIQGPVG
LPGPAGPPGTAGEDGDKGEVGEPGQKGAKGSKGEHGPPGPLGPMGPVGQPGAAGADGETG
ARGQQGPFGAKGDDGTRGFPGPPGPIGLQGLPGPAGEKGETGDVGPMSMRFPLGTQESPA
RTCQDLHLSQPDLKDGEYWIDPNQGCARDSFKVYCNFTAGGETCLYPSKAVENVKMNTWP
KEKPGSWFSQFAKGSKFSYVDWSGEPVGVVQLGFLRLLSVQARQNLTYHCQRSVAWADLT
ADSGYQRALHFQGANDEELSYETSPYIKALVDGCSYRKGLDRTVLEVNTPQVEQLPLLDI
RISDFGEDNQKFGFEVGPVCFLG
NT seq 3492 nt   +upstreamnt  +downstreamnt
gagggaaaggcgaacaatggcaaagctgataagccaaaaactgccccagccaaagctgct
ccagctaaaaccaagccaactacaaagccgaaggccaaacctatctcaaagacaaaacct
actttagcttctaaactagcatccaaaccaaaagtaacaccggccccaaagattgaaaac
aaaaagaaggcaaacgacaatggaaaaaataacggtcaagctaaagtaaatggtaatggc
aatggcaatggcaaaagcaatgggaatgggaaagatgctaatggtaaggctaaggctggc
agcaatggcaaagccaataacaatggcaatgggaaggcagctgtggagaaaaaagcaaaa
ggggaagctaaagctaatggcaatggtgcgaaaacagtgaagactgaaaaggcagcagtg
accaaagaaacagtagcaaagaagtcagagacaactgcgaagaaagcagagaccagacca
caaccagccaaagacaaaacaaaagccaatgcagtacctaaagcaaagcctaaagcgacc
aaacctgtggtagaaaagtttccgaccaaagtcgctaaaactccaaaacctgttgctttt
aaacccacccctgcgcctttgcctctccctccaaagcctaaggtcttggatgtcaataac
ttcaaatcaatgtccaaaactttcccacccttcgacaaggctgctgtgagtggcacaacc
atgtcttctccagaaatacccaagaagaaacccaccaatggttatcaacaggtacaaaat
caagagcccgcgttggctttccagagctgtatttccaacctcgccatcctggtagtccag
gaccgcgttcataaagttgacgagactgttggcgctgaggaagtagatgcgaccaagaca
ggtggtgaaggggtgtctcaaacgccagacgagcccttcattgaggagtacattacaagc
gactttggaacaaaggagtatgactattcctacagggactacaatgagcccatcatcgaa
agcaagacggaagacacctttggccctgccctgtccgctgtgacagatgagggaggtggc
atgttgattgaaggaccacctggaccagaaggaccagcaggtctccctggctccgctggc
ccccagggaccccctggttctgttggtgatcctggtgagaggggccccagaggtcctcat
ggattgtctggtcctcctggtaaatctggtcggaggggtcgggctggtgctgatggagcc
agagggatgccaggagagtctggaattaaggtcggacatcttaaccctttttgcgtctgt
ggagagaaagggcccacaggaaagcctggtttaccaggaatgcccggaggtgacggtcct
ccaggtcatcccggaaaggaaggccccactggaaccaaaggaaatcagggtcctaatggt
cctcaggggtctattggctatcctggccctcggggaattaagggaactcaaggtatccgt
ggactgaagggccataagggagagaagggagaggatggattccctggaatcaaaggagac
tttggtgtgaagggagagaggggagaggtgggagtgcctggcccaagaggagaggacggt
cctgagggtccgaagggtcgtgtcggtccccttggtgaaatcggtcctattggcctggtg
ggagagaagggtaaacttggtgtgcctggacttcctggatatcccggaaggcaaggaatt
aagggctccctgggtttcccaggattccctggtgcaaatggcgagaaaggcgcgaggggt
ttgattggaaaaactggaccaagaggacagagagggccgacaggtcccagagggcagaga
ggaccccgtggggcaactggaaaatcaggcgctaagggcggatctggcagtgacgggcct
tctggaccacctggggagagaggactaactggacttcaaggtccaaatggattccctggg
ccgaagggacctcctggacctccagggaaagatggactgcctggacaccctggacagaga
ggcgaagttggtttccaaggcaaaactggaccacctgggccaccgggagttgttggacca
cagggtccctctggtgagactggaccgatgggtgagcgtggtcattcaggacccccagga
ccacccggtgagcaaggtctttctgggccttctggtaaagagggaaccaaaggagatccc
ggtccctccggcggccccggtaaagacggaccccctggactgagaggattcccaggagag
agaggactgccaggaacttcaggcactggaggactgaaaggaaatgaaggccctgctgga
ccacccgggtctgctggatcacctggggagagaggagcagctggcaccgcaggtactgtt
ggcccacctggacgacctggacctcaggggccccctggagctgcgggagagaagggagtg
ccaggagagaaaggtccaattggtccagctggtcgcgacggcatccaaggtccagttggt
ctcccaggccctgctggacctccaggtactgctggagaggatggagacaagggtgaggtt
ggagagccaggacaaaagggagctaaaggatccaagggagaacatggtcctcctggtcca
cttgggccaatgggtcctgttggacagcctggtgcagctggtgctgatggtgagacaggt
gcgaggggtcaacagggaccatttggcgctaagggagatgatgggacaagagggttccca
ggtcctccaggccccatcggactgcagggtttgccgggcccagctggagaaaaaggagag
acgggagatgttggtccaatgagcatgcgcttcccgctgggaacacaggaaagcccggcc
cgcacctgccaggacctccacctcagccaaccagatctgaaagacggtgagtactggatt
gatccaaatcaaggctgcgctcgggactcgttcaaggtttactgtaacttcactgccgga
ggagagacgtgcttgtatcccagcaaagctgtggaaaatgtgaagatgaacacttggcca
aaggagaagcctgggtcctggtttagtcagtttgcaaagggcagcaagttttcatatgtt
gactggagtggagagcccgtgggtgttgtccagctgggattcctgcggttgctcagcgtt
caggcccgtcaaaacctgacctaccactgccagcgatcagtggcctgggcggacctcact
gccgacagcggctaccagagggcgctacacttccagggtgccaatgatgaagagctcagc
tacgagaccagcccctacatcaaagccctcgtcgacggctgctcttatcgtaaaggcttg
gacaggacagtgctggaggtgaacacacctcaggtggagcagctccctctgctggacatc
aggatctcagactttggggaggacaatcagaaatttggttttgaagtgggacctgtctgt
ttcctgggataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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