KEGG   Sinocyclocheilus grahami (golden-line barbel): 107576365
Entry
107576365         CDS       T04918                                 
Name
(RefSeq) collagen alpha-2(IX) chain-like
  KO
K08131  collagen type IX alpha
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04510  Focal adhesion
sgh04512  ECM-receptor interaction
sgh04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107576365
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    107576365
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107576365
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:sgh00535]
    107576365
Proteoglycans [BR:sgh00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   107576365
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 107576365
NCBI-ProteinID: XP_016118044
Position
Unknown
AA seq 434 aa
MDYRDREDLPIMQSTTVQAQVGTKGGVGISGEQGIPGPPGPHGLRGYPGMVGPKGETGPR
GYKGISGPIGIPGRPGEEGPQGPPGESGDKGDMGESGIRGPQGVVGKKGENGLPGIDGKD
GTPGIPGIKGATGQNGRPGGSGLQGDPGLPGMPGAKGEIGVMGETGPRGFMGMQGLPGPQ
GEPGPPGEPGMEGVPGPKGDRGERGPVGPPGIVGLLGSKGERGPMGIPGAQGLPGTKGEK
GFQGKVGSKGDIGDPGVEGLAGEKGEKGQSGEPGPKGQLGVTGDPGHNGPTGDPGKPGDQ
GPSGLPGSRGLHGERGVPGMPGIQGPSGRDATDQHIVDVVLKMLQEKLAAVAVSSKRAAL
GGAGVMGPPGHPGPPGSPGPQGSHGLPGGRGIPGMIGASGQIGNTGLKGKRGAKGERGDP
GRPHPGQPGPPGLP
NT seq 1303 nt   +upstreamnt  +downstreamnt
atggactacagggacagagaggatttacccataatgcagagcacgactgtccaagctcaa
gttggtacaaagggtggagtcggcatctccggtgaacaaggaataccaggccctccaggt
ccacatggtctgagagggtatccaggaatggtggggcccaaaggtgagacgggaccacgt
ggttataaaggaatttcaggaccgatcggcatccctggacgccctggtgaagagggaccc
caaggaccacctggagagtctggtgacaaaggcgacatgggagagagtggtatacgaggg
cctcagggagttgtcggaaaaaagggagagaacggtcttccaggaattgatggaaaagat
ggtactcctggcatcccaggaataaagggtgctacgggacaaaatggaagacctggaggt
tctggtctccagggagaccctgggttacctggtatgcctggagccaagggtgaaattgga
gttatgggtgagacaggaccccgaggctttatgggaatgcaaggtcttccaggacctcaa
ggagagcctggtcctccaggtgaacctggcatggagggagtcccaggaccaaagggtgac
aggggtgaaagaggaccagttgggcctcctggcattgttggcttgcttggcagtaaggga
gagaggggacccatgggcatcccaggtgctcagggtttacctggaactaaaggtgaaaag
ggattccaaggcaaagtgggatcaaagggagacattggtgatcctggtgtagagggattg
gctggagagaaaggagagaagggacaatctggggagcccggacctaagggacagctaggt
gtgactggtgatccagggcacaacggccctactggagatcccggtaaaccaggagaccag
ggtccttcaggcttacctggttcacgtggcctgcatggagaaagaggagttccagggatg
ccaggaatacaaggaccgtctggtcgtgatgctacagatcaacacatcgttgacgtagtc
ctgaagatgctgcaagagaagttagcagcggtagcggtgagctccaagagagcggcgctg
ggtggagcaggtgtgatgggacctccaggtcatccaggaccacctggatctccaggacct
cagggttctcatggactgccaggcggccgtggcattcctggcatgatcggggcctcaggc
cagataggaaacactggtcttaaaggaaagaggggtgcaaagggagagagaggagatcct
ggccgaccacatcctggccaaccgggaccacctggactgccag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system