KEGG   Sinocyclocheilus grahami (golden-line barbel): 107585942
Entry
107585942         CDS       T04918                                 
Symbol
sox6
Name
(RefSeq) transcription factor SOX-6 isoform X1
  KO
K09269  transcription factor SOX5/6/13 (SOX group D)
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sgh03000]
    107585942 (sox6)
Transcription factors [BR:sgh03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    107585942 (sox6)
SSDB
Motif
Pfam: HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 107585942
NCBI-ProteinID: XP_016128610
Position
Unknown
AA seq 796 aa
MPSSSEVVCEEQRRTGAAKQAEGDSIRIMSSKQATSPFASTPDGGEDGVNQEHMSWEKEE
NLESLVAPQLPLHNLLHNKPPPEELQPISSSVPPESDWDSLMSAQQRMESDSNKVCSLYS
FRNNSTSPHKPEEGARERGDLLSSSAFGTPERRKGSLADVVDTLKQKKLEEMTKTEQDES
CMEKLLSKDWKEKMERLNTGELLGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDE
QKKLAASQMEKQRQQMELARQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGHMPPLMIP
IFPHDQRTLAAAAAAQQGFLFPPGMSYKPGDNYPVQFIPSTMAAAAASGLNPLQLQQLYA
AHLASMQVSPGAKMPLLSQPPNSTGPISPSGLKNEKRASTPLAQVKEEGTQPLNLSARPK
TAEPVRSPTSPTQIFFPGNKSSPNNLSKSGGIPSPIGGMGRGSSLDILSSLNSTALFGDQ
DAVMKAIQEARKMREQIQREQFQHHQQGMEAKLSALTSMGLNNCRSDKERSHYDNLSHHL
GKLGEDGKIGHRVIDLTRPEDFEGGASSTEARVYREPRGRNSNEPHIKRPMNAFMVWAKD
ERRKILQAFPDMHNSNISKILGSRWKSMTNQEKQPFYEEQARLSKIHLEKYPNYKYKPRP
KRTCIIDGKKLRIGEYKQMMRSRRQEMRQFFTVGQQPQTQIPITTSAGVVYPGAITMATT
TPSPHMTSDCSSASASPEPTIPVIQSTFNMKMEPGTMVSNDPVNGVDEMDMYEDFEDEPK
SDYSSENDTQEPVSAN
NT seq 2391 nt   +upstreamnt  +downstreamnt
atgccatccagctctgaagtggtgtgtgaagaacagagaaggactggagcggccaaacag
gctgagggggacagtatcagaatcatgtcttccaagcaagccacctctccattcgcctcg
acccctgacggaggcgaggatggagtgaatcaggagcacatgtcctgggagaaagaggag
aacttggagtcactagtcgcccctcagctgcccctgcacaatctgctccacaacaaacct
cccccagaggagctccagccaatcagcagcagcgtgccgcccgaatccgactgggacagc
ctgatgtcagcccagcagcgcatggaatcggacagcaataaagtatgttccttatactcc
ttccggaataactctacctctccacacaagccagaggagggggccagggagcgcggcgac
ctgctgagcagttcagccttcggaacgccagagcgccgcaaaggaagcctggccgatgtg
gtggacacactgaaacagaagaaactagaggagatgacaaagacagagcaagacgaatcc
tgcatggagaaactcctttctaaagactggaaagagaagatggagcgactcaacacaggc
gagctgttaggagaaattaaaggtactccagaaagtctcgcggagaaggagcgacagctc
tccaccatgatcacacagctcatcagcctgcgagagcaactcctggccgcccatgatgag
cagaagaaactggccgcctcacagatggagaaacaacgtcagcaaatggagctggcacgc
caacagcaagagcagattgccagacaacagcagcaacttctgcagcaacagcacaaaatc
aatctcctccagcagcagatccagcaggtccagggtcacatgcctccgctcatgatcccc
atttttccacacgaccagcgcactctggcagcagccgcggcagcccagcagggcttcctc
ttccccccaggcatgtcctacaagccaggtgataactacccggtgcagttcattccatcc
acaatggcagctgctgccgcgtcaggactcaaccctctccagctccagcaactctatgcc
gcccatctggccagcatgcaggtctctccaggagccaagatgcctctgctgtcccagccc
cccaattctactgggccgatctccccgtctggcttgaagaatgaaaagagggcttcaacc
cccctggctcaagtcaaggaggagggaacgcagcctctcaatctctccgctcggcccaag
acagctgagcctgtcagatcccccacatccccgacacagatcttcttcccaggcaacaag
agcagcccgaacaacctgtccaagagcggaggcatccccagccccatcggagggatgggc
cgtggctcgtctctggacattctgtccagcctgaactcaacagcgctgtttggagatcag
gatgcagtgatgaaggccatccaggaagcgaggaagatgagggagcagattcagagagag
cagtttcagcaccatcagcagggaatggaggccaaactgtctgccctcaccagcatgggc
ctgaacaactgcagatctgataaggagaggtctcattatgataacctgagccatcacctg
ggcaaactaggcgaggatgggaagattggtcacagagtcatcgacctcaccaggccagag
gattttgagggaggcgccagctctaccgaggcacgggtctacagggaaccccggggaagg
aacagcaacgaacctcacatcaaacggcccatgaacgccttcatggtctgggccaaagat
gagcgccgcaaaatccttcaggccttcccagacatgcacaactccaacatcagcaaaatc
ttgggatctcgctggaagtccatgacgaaccaggagaaacaaccgttttatgaggagcag
gcacggctcagcaagatccacctggagaagtatcccaactacaagtacaagccccggccc
aagcgcacctgcatcatcgacggcaagaagctgcgcataggcgagtacaagcagatgatg
aggtcgaggaggcaggagatgaggcagttcttcactgtggggcagcagccacagacgcag
atccccatcaccaccagcgcaggcgtcgtctaccccggtgccataaccatggcgaccact
acgccctcccctcacatgacctcagactgctccagtgcctcggccagccccgagcccacc
atccctgtcatccagagcaccttcaacatgaagatggaaccgggcaccatggtgtctaac
gaccccgtgaatggagtggacgagatggacatgtacgaggactttgaggacgagcccaaa
tcggactacagcagtgagaatgacacacaggagccggtcagtgccaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (8)   
   RefSeq(pep) (8)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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