KEGG   Sinocyclocheilus grahami (golden-line barbel): 107588325
Entry
107588325         CDS       T04918                                 
Name
(RefSeq) lysine-specific demethylase 2A-like
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    107588325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sgh03000]
    107588325
   04121 Ubiquitin system [BR:sgh04121]
    107588325
   03036 Chromosome and associated proteins [BR:sgh03036]
    107588325
Enzymes [BR:sgh01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     107588325
Transcription factors [BR:sgh03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    107588325
Ubiquitin system [BR:sgh04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     107588325
Chromosome and associated proteins [BR:sgh03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    107588325
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     107588325
SSDB
Motif
Pfam: PHD_4 zf-CXXC JHD F-box-like JmjC F-box Cupin_8 LRR_6 PHD LRR_4 Rubredoxin
Other DBs
NCBI-GeneID: 107588325
NCBI-ProteinID: XP_016131866
Position
Unknown
AA seq 1190 aa
MPDPDFSVSDVKLFVGSRRMVDVMDVNTQKGIEMSMGQWRRYYETPPSEREKLYNVISLE
FSHTKLEHLVKRPTSVDMIDWVDNMWPRHLKESQRDSTNAIIEMQYPKVQKYCLMSVEGC
FTDFHIDFGGTSVWYHILRGRKVFWLIPPTPQNLELYENWVLSGKQGDIFLGDKATMCQR
IELKQGYTFMIPSGWIHAVYTPMDTLVFGGNFLHSFNIPMQLNVYNIEDRTRVPAKFRYP
FYFEMCWYVLERYLYCLTNISHLTPEFQKHSLGIGLKKEDVIKQGGFNGQEENIVEEEEE
MVKEEPEEEAASPARPGVKVHLTPLELEGLWELLHKLEELPAHKKCVPAGIRNAPALLSD
IRKLLEEHANDNPKLSYTGKPIVKWPKRPSWYEPPPLPLSLLYRPRAPGSAPVLPLVPRP
VKPSSSISALRRRRVRCKRCEACLRTECGDCNYCRDMRKFGGPGRLKKSCVLRQCLAPAL
PLTAVCAICKEGYLESIDSESVQTLMECSECAQITHPECIKVHVPGEGIINKDLPSCWEC
PKCVQGKKTESSSSSEEETDSSVSNGSRLSGPPAKRAYREGIGVGGLRIGRKGRPPLSLS
SPPLTRSRRQPPPSQRLLLQHQQNRRRAGALELQLRKRIKLERNKILQSTRSSVSLSPKL
LRQRSLERGGVVRAGPRRSISRGRGMSSCRGRGVRLRGGGQGGGLRERMEMGVERDDSVE
EEQEERKENGQYNGKENRPQKRGGQAGEDENGESHRNGESEGSSEGGEATPSDTSMVLND
DVGGQGSCVTVTLQPSRGRRDPSAIVPKLEANLSSRSLPQNHKALLRPPLRNGAPRSDSP
HSPADRLHVNKSHALSSSPHTLTRSASKHSHMVRSLRSNFKDSPHRLTRERIGKKTRSEK
AKSSDSCPSSTLRPSAEQNGGNEPGWEREVWVSVFRYLTRAELCVCMAVCKSWYKWGCDK
RLWTRISLSRCRSISPQALTGIIKRQPVTLDLSWANISKKQLSWLINRLPGLKDLVLSGC
NWASVSALSSPSCPLLRSLDLSCADGVKDAQIRELLNPPGSDNRSQMKNMQCLWLCSLEV
TEATLRLIIRHMPLLTRLELSHCPITDGALNLLSAVGSSTRNTLTHLNLAGCSRLTDRCL
VYLRRLSCLSVLDLRGCKGVSRQACESFISELSVNALYCLSDDKLVQRIS
NT seq 3573 nt   +upstreamnt  +downstreamnt
atgcctgacccagactttagtgtcagtgatgtgaaattgtttgtgggcagtcgcaggatg
gttgatgtgatggatgtgaacactcaaaaaggcattgagatgtcaatggggcagtggagg
agatactacgagacgccgccttctgaacgtgaaaaactctacaatgtgatcagcctggag
ttcagtcacacaaaactagaacatctagtcaagagacctacctcggttgatatgattgac
tgggtggacaacatgtggccacggcatcttaaagaaagtcagcgagactccaccaatgcc
attatagaaatgcagtaccctaaagtacagaagtattgtctgatgagtgtcgagggatgc
ttcacagatttccacatagactttggcggcacatcagtctggtatcacatcctcagggga
aggaaggtgttctggctgatcccgcccacacctcagaacctggagctctatgagaactgg
gtgttgtcagggaaacagggtgacatctttctcggcgataaagccacgatgtgccaacgg
attgaactgaagcaaggctacacattcatgatcccctcagggtggatccatgcagtttac
actccaatggatactctggtgtttgggggaaactttctgcacagctttaacattcccatg
cagcttaacgtttacaacattgaggaccgcacacgggtccctgctaagttccgctaccct
ttctactttgagatgtgctggtatgtgttggagcgttacttgtactgtctgaccaacata
tctcacctcacacctgagttccagaagcactcactgggcattgggctaaagaaggaggat
gtgattaaacaaggaggctttaatggtcaagaagaaaatatagtggaagaggaggaggag
atggtgaaggaggagccggaggaagaggcagcatctcctgctcgtccaggggtgaaagtt
cacctgacacccttagagctggaagggctttgggaattactgcacaagttggaggaattg
ccagcacacaagaaatgtgttccagcaggcatcagaaatgccccagcactactcagtgac
atacggaagctgctagaggaacatgccaatgataaccccaaactgtcttacactggaaaa
ccaatcgtcaaatggcccaaaaggccctcgtggtatgagccgccgccgctgcctctgtct
ctgctgtaccgcccgcgtgctcccggctcagcccccgtgttgccgctggtacctcgaccc
gtgaagccgtcttcctccatctcggctctgagacgcagacgtgtgcgatgcaaacgctgc
gaggcctgtctgcgcaccgagtgtggcgactgcaactactgtagggacatgaggaagttt
ggaggaccgggcagactcaagaagagctgtgttctccgtcagtgtcttgcaccggcgcta
cctcttactgcagtatgtgccatatgtaaggaaggctatctggagtctatagactcagag
tccgtccaaacgctcatggaatgctccgaatgcgctcagatcactcatccagaatgtata
aaggtacatgtgcccggtgagggtattattaataaggaccttcccagttgttgggaatgt
ccaaaatgtgtccagggcaagaaaacagagtcttccagtagtagtgaggaggagacagac
agcagcgtgtccaacggcagtcgcttgtctggtcctccagctaagcgggcatacagagag
gggattggggtggggggtctgcgtatagggcgcaaaggtcgcccgcccctctccctctcc
tccccgcctctgacccgctccagacgacagccgcccccttcccagagactcctgctgcag
caccaacagaacaggaggagagcgggagcgctggagttacagctcaggaaaaggataaaa
ttagaaaggaataaaatcctccagtcgacccgttcgtctgtctctctttctccaaagctc
ctgcgtcagcggagtctggagagagggggtgtagtcagagcgggtcccagacggagcatt
tcccgtggccgagggatgtcctcctgtcgcggaagaggggtacgactccgaggcggtggc
caagggggaggcctgagagaaagaatggagatgggggttgaaagagatgactctgtggaa
gaagaacaggaggagaggaaagagaacggacagtataatggtaaagagaaccgtcctcag
aaacgagggggtcaagctggtgaagacgagaacggagaaagccatcgaaacggagagagc
gaggggagcagtgagggaggagaggccactccatctgacacttctatggtgctaaatgat
gatgtcggaggccaggggtcctgcgtcacagtgacattacagccatcgaggggtaggcgc
gaccctagcgccattgttcccaaactggaagccaacttgtcttctagaagccttccacaa
aaccacaaagccctgctccgtcccccactgcgaaacggtgcccctcgctcagacagtcct
cattcgcctgcagacagattgcacgtaaacaaatcacatgctctttcatcatcaccgcac
actctgaccagaagtgcatccaaacactcacacatggtgcggagtctgagatcaaacttt
aaagattcccctcaccggctgactcgagagagaattgggaaaaagactcgatcggaaaag
gcgaaatcctccgactcttgtcccagttccactttgcggccctcagcggagcagaacgga
gggaacgagccaggctgggagagagaggtttgggtgtccgtgttccgctacttgactcgt
gcagagctgtgcgtttgcatggctgtttgcaagagttggtacaaatggggctgtgacaag
cgtttatggacgcggatcagtctgagccgctgccgctctataagtcctcaggccctcacg
ggcatcatcaaacggcagcctgtcacactggacctctcctgggccaacatctccaagaag
cagctcagctggctcatcaaccgcctgccaggccttaaagacctggtgctatcagggtgt
aattgggcgtcagtctcagcactgagctctccaagctgtcctttactgcgctctttagac
ctgagctgcgccgatggcgtcaaagatgcacaaatcagggagctactgaacccaccaggc
agtgacaaccgttcccagatgaagaacatgcagtgcttgtggctgtgcagtctggaggtg
accgaagccacgctgaggctgatcatcagacacatgcctctgctcactcgtctggagctc
tcgcattgtcccatcacagatggtgctctcaacctcctcagcgccgtgggctcctccaca
cgcaacacactcacacacctcaacttagcaggttgcagccgcctgacagaccggtgtctg
gtgtacctgcggcgcttgtcctgtctctccgtactggacctgcgcggctgcaaaggggtc
tcgcggcaggcgtgcgaaagctttatctccgagctgtctgtcaatgccctctactgccta
tcagatgacaagctcgtccagaggatatcgtaa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (33)   

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