KEGG T04918: 107590361

Sinocyclocheilus grahami (golden-line barbel): 107590361

Entry

107590361         CDS       T04918

Name

(RefSeq) E3 ubiquitin-protein ligase Hakai-like isoform X1

K15685

E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]

Organism

sgh Sinocyclocheilus grahami (golden-line barbel)

Brite

KEGG Orthology (KO) [BR:sgh00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sgh03019]
    107590361
   04131 Membrane trafficking [BR:sgh04131]
    107590361
   04121 Ubiquitin system [BR:sgh04121]
    107590361
Enzymes [BR:sgh01000]
2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107590361
Messenger RNA biogenesis [BR:sgh03019]
Eukaryotic type
  mRNA processing factors
   3' end processing
    N6-methyltransferase complex
     107590361
Membrane trafficking [BR:sgh04131]
Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    107590361
Ubiquitin system [BR:sgh04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    107590361

SSDB

Motif

Pfam:

zf_Hakai zf-C3HC4 zf-RING_5 zf-RING_UBOX zf-C3HC4_2 zf-C3HC4_3 zf-RING_2

Other DBs

NCBI-GeneID:

107590361

NCBI-ProteinID:

XP_016134556

Position

Unknown

AA seq 488 aa
MDHSDNDMQGTDGPLGGPDVRRRIPIKLLPKQARNKPAPRPQRPAGRLPPKAHSAEEEGF
NFKQEDRFDCGVKAGDAFASQRRFPQQLYWDYKLNLIGEKDETPVHFCDKCGLPIKSYGR
MIPCKHVFCYECALHHERKGDKMCPGLNMYSCTDLVQRIEQCQRGSLYMCSIVQGCKRTY
LSQRDLQAHINHRHMRSGKSSSSRSDSLHLPLASEVTDRFRVPPPHLPKPHVLIPPPLAH
PGHDPYSQPPSASHDDLRPPQGQPPGDMGPSRSLAQETFRISTVTTRKHSNLITVPIQDD
SASSGPSRDPLPQPGNAPPPHHHPGDYPGQPVVTHPHHMMAPPQQHYGPPPPPPPISHPM
PHPGQGSNTPHMVFNQAPPPLSSVPPPITPPPGHLIGQMPPFMNHPPPGPPPQHGGPPVS
APPPHHYNPQFPEDKSTLSPPFNQPGGLSPGMWPAPRGPPPRMQGPPPQGQMPGPHHPDQ
GRYRPYYQ

NT seq 1467 nt +upstreamnt +downstreamnt
atggaccacagtgacaatgatatgcagggtacagacgggccgttaggtggtcctgatgtc
aggaggaggatcccaatcaaacttcttcccaaacaggccaggaataaacctgcccctcga
ccccaaagaccagcgggacggttaccacccaaagcccattctgcagaagaagaagggttt
aacttcaagcaggaggacagatttgattgtggcgtgaaagctggagacgcttttgcgagc
cagcgtcgcttcccacagcagctgtactgggattacaagctaaatttgatcggtgaaaaa
gatgagacacctgttcatttctgtgacaaatgtggacttccaattaagtcatacggccga
atgatcccatgtaagcatgttttctgctacgagtgtgcattgcatcatgaaagaaagggt
gataagatgtgtccaggcctaaacatgtacagctgtaccgacctggttcagcggattgaa
cagtgccagcgtggctctctctacatgtgtagtatcgttcagggttgcaaacgcacctat
ctgtcccagagagacctgcaggctcacatcaaccaccggcacatgcggtccggcaagagc
tccagcagccgctctgattctctccaccttcctctagcctcggaggtgaccgaccgcttc
cgtgtgcccccacctcacctgcccaaaccccatgtgctcatccctcctcctctggctcat
ccaggacacgacccctacagccagcctccctctgcctcccacgatgacctccgacctccg
caaggccaaccccccggagacatgggaccatcccgctctctcgctcaggagaccttccgg
atctcgaccgtcaccacgcggaagcacagcaacctcatcacggttcccatccaggacgat
tccgcaagctccggaccatcccgcgaccccctcccccagcctggcaatgctccgccccct
caccatcaccccggagattatccaggtcagcctgttgtgacccatccacatcacatgatg
gcgccacctcagcagcactacggccccccgccgccccctccccccatcagtcatcccatg
ccgcacccgggacagggctcaaacacacctcacatggttttcaatcaggcccctccgccg
ctgtcatctgttccccctcccatcaccccacctcccggacacctcattggtcagatgccc
ccgtttatgaaccatcctcctccagggccgccccctcagcacggaggtccccctgtcagt
gcaccgcctccccaccattacaacccccagtttcctgaggacaagagcacactcagccca
ccattcaaccagcccgggggcttgagtccaggaatgtggccggctcccaggggtcctcct
cctcgaatgcagggtccccctccacagggacagatgccagggccgcatcaccccgatcag
ggccgctacagaccgtattaccagtaa

All links

Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (7)   
   Pfam (7)   
All databases (26)   

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