KEGG   Sinocyclocheilus grahami (golden-line barbel): 107591591
Entry
107591591         CDS       T04918                                 
Name
(RefSeq) collagen alpha-2(I) chain-like
  KO
K06236  collagen type I alpha
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04510  Focal adhesion
sgh04512  ECM-receptor interaction
sgh04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107591591
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    107591591
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107591591
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:sgh00536]
    107591591
Glycosaminoglycan binding proteins [BR:sgh00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   107591591
SSDB
Motif
Pfam: Collagen COLFI
Other DBs
NCBI-GeneID: 107591591
NCBI-ProteinID: XP_016136266
Position
Unknown
AA seq 1352 aa
MLSFVDTRILLLLAVTSYLASCQSGPRGPKGPRGERGPKGPDGKPGRPGLVGPPGPPGPP
GLGGNFAAQYDSAKGSDPGPGPIGLMGPRGPSGPPGAPGPQGFQGHAGEPGEPGQAGAVG
SRGPPGPPGKNGEDGNNGRPGKPGDRGTPGGQGARGFPGTPGLPGMKGHRGYTGLDGRKG
ESGAAGLKGENGAAGSNGNPGQRGDRGLPGERGRVGPSGPAGARGADGNTGPAGPAGPLG
AAGPPGFPGAPGPKGEIGPAGPNGPSGPQGQRGEPGTNGAVGPAGPPGNPGANGINGAKG
AAGTPGVAGAPGFPGPRGGPGPQGPSGASGPRGLAGDPGPVGVKGDAGVKGEPGSSGPQG
PPGPSGEEGKRGSTGEQGATGVSGMRGPRGATGTRGLPGLAGRSGPMGMPGLRGATGTAG
ARGPPGDAGRAGEPGLVGARGLPGSPGSSGPPGKEGPVGTAGQDGRSGPPGPTGPRGQPG
NIGFPGPKGPSGEAGKPGEKGPAGPTGLRGIPGPDGNNGPAGPVGLVGASGEKGEQGPAG
APGFQGLPGPAGPVGEAGKPGDRGIPGDQGVSGPAGVKGERGNPGPAGAAGAQGPIGARG
PAGTPGPDGNKGEPGAVGAAGAPGHQGAGGMPGERGGAGTPGPKGEKGELGYRGLEGNAG
RDGARGAPGPSGPPGPAGANGDKGETGSFGPSGPAGPRGTPGERGESGPAGPSGFAGPPG
ADGQTGQRGEKGPAGGKGDVGPTGPAGPAGNTGPLGAAGPAGPPGARGDSGPPGLNGFPG
AAGRVGPPGPAGIIGPSGLTGAPGKDGPRGARGDVGPAGPPGENGLIGPSGLAGEKGSPG
EAGVPGVPGPAGPQGQLGSLGFNGLPGSRGDRGLPGGPGAVGEPGRVGPAGAPGARGPSG
NNGMPGMTGPQGEAGREGSPGNDGPPGRPGAAGLKGDRGEPGSPGTAGPVGAPGPNGPSG
AVGRPGNRGESGPSGSAGPAGAVGARGGPGPAGPRGEKGVAGDKGERGMKGLRGHPGLQG
MPGPNGPSGDSGPAGIAGPAGPRGPAGPNGPPGKDGSNGMPGAIGPSGHRGPPGHVGPSG
PPGTPGLPGPPGQAGGGYDTSGGYDEYRADQASLRAKDYEVDATIKSLNTQIENLLSPEG
SKKNPARTCRDIRLSHPEWSSGFYWIDPNQGCTMDAIKAYCDFSTGQTCIHPHPESIPRK
NWYRSSQEKKHIWFGETINGGTEFGYNDETLSPQSMATQLAFMRLLANQAVQNITYHCKN
SIAYMDAENGNLKKAVLLQGSNDVELRAEGNNRFTFSVLEDGCSRHTGQWSKTVIEYRTN
KPSRLPILDIAPLDIGGADQEFGLDIGPVCFK
NT seq 4059 nt   +upstreamnt  +downstreamnt
atgctcagctttgtggatacccggattctgttgctgcttgcagtgacttcgtacctagca
tcatgtcaatcgggccccaggggaccaaaaggacccagaggtgagaggggtcctaaagga
ccagatggaaaacctggcagacctggacttgttgggcctcccggcccccctggccctcct
ggtcttggtggaaactttgctgctcagtatgatagtgctaaaggatctgaccctggccct
ggacctataggtttgatgggacctagaggcccatctggacctcctggtgcccctggacct
caaggattccaaggacatgctggtgagcctggagagcccggacaggctggagctgttggt
tctcgtggccctcctggacctcctggcaaaaatggtgaagatggtaacaatggcagacct
ggaaaacctggagacagaggaacccctggaggacagggcgcccgtggtttccctggaact
cctggacttcctggcatgaagggacacagaggttacaccggtcttgacggacgcaaagga
gagtctggtgccgctggtcttaagggtgagaatggtgctgctggatcaaatggaaaccct
ggacagagaggtgatcgtggtcttcctggtgagagaggtcgtgttggaccttctggccca
gctggtgctcgtggtgctgatggcaacactggtcctgctggccctgctggtcctttggga
gcagctggtcctcccggtttcccaggtgcccctggacctaagggagaaattggacccgct
ggtcccaatggcccatctggacctcagggacaaagaggagagccaggcacgaacggtgct
gtgggcccagctggaccccctggtaaccctggtgctaacggtatcaatggtgctaaggga
gcagctggcacccctggagttgctggtgcccctggtttccctggccctagaggaggcccc
ggcccccagggaccttctggagcctctggtccaagaggtcttgctggtgaccctggaccc
gttggagtgaagggagatgctggtgtcaagggtgagcctggtagttctggtcctcaggga
ccccctggtccttctggtgaagagggcaagagaggctcaactggtgagcagggagctact
ggagtcagtggaatgcgtggacctagaggagccaccggtactcgtggtctgcctggtctg
gctggaagatccggcccaatgggcatgcctggtctccgtggtgctactggtaccgctgga
gctcgtggacctcctggagatgctggccgtgctggtgagcctggtcttgttggagccaga
ggtctccctggtagccctggcagttctggaccccctggaaaggaaggacccgttggtacc
gctggtcaagatggccgcagcggaccccctggcccaactggacccagagggcagcccggt
aatattggattccctggtcctaagggaccttctggcgaggctggcaagcctggtgagaag
ggacctgctggccccactggactgagaggtatccctggtcctgatggtaacaacggccct
gctggtcccgtcggacttgttggtgcctcaggtgagaagggagagcagggaccagctggt
gctcctggtttccagggtcttcctggccccgctgggcctgtcggtgaggctggcaagccc
ggagatagaggtatccctggagatcaaggtgtatcaggacctgctggagtgaagggagag
cgtggtaaccctggacccgctggtgctgctggcgctcagggacccattggtgctcgtggc
cctgccggtactcctggccctgatggaaacaagggagagcctggtgcagttggagctgct
ggtgcccctggacaccagggagctggtggtatgcctggtgaacgtggtggcgctggaact
cctggacctaaaggagagaagggtgagcttggatacagaggactggagggcaatgctgga
agagatggtgcccgtggtgctcctggacccagtggaccccctggacccgctggtgctaat
ggtgacaagggtgagactggctctttcggtccttctggacctgctggtcctcgtggtact
cctggagaacgtggtgagtctggccctgctggaccttccggatttgctggaccccctggt
gctgatggccagactggacaaagaggtgagaaaggacctgctggtggaaagggtgatgtt
ggacccacgggccctgctggtcctgctggcaatactggacctctcggtgctgctggtcct
gctggcccacctggtgcccgtggtgacagcggtccccctggtctgaatggcttccctgga
gctgctggcagagttggacctcctggtcctgctggtattattggaccttctggtctcact
ggtgctcctggaaaggatggcccacgtggtgctcgtggtgatgttggccctgctggtccc
ccaggagagaatggacttattggaccatctggtctggctggcgagaagggatcccctgga
gaggctggcgtacctggagtacctggacctgctgggcctcagggtcagctgggatctctg
ggattcaatggtcttcctggttccagaggtgaccgtggtcttcccggtggccctggtgct
gttggtgagcctggaagagttggccctgctggtgcccctggtgcccgtggtccctctggc
aacaatggcatgcctggtatgactggtcctcagggtgaggctggacgtgagggaagccct
ggtaatgatggacctcctggccgtcccggtgctgctgggcttaagggtgaccgtggtgag
cctggttcccctggaacagctggacctgttggcgctcctggacccaatggaccatcaggc
gctgttggcagacccggaaaccgtggtgaatctggaccttctggatctgctggccctgct
ggagctgttggagcaagaggtggacctggccctgctggacctcgtggtgagaaaggtgtt
gctggagacaaaggagaaaggggcatgaagggacttcgtggacatcctggcttgcaggga
atgcccggacccaatggtccttctggtgacagcggccctgctggtattgctggtcctgct
ggtccaagaggcccagcaggtcctaatggcccccctggtaaggatggttcaaatggcatg
cctggtgctattggaccctctggacaccgtggtcctcctggacatgttggaccttctggt
cctcctggaactcctggtcttcccggaccccctggtcaagcgggtggtggatatgacaca
tctggaggctatgatgagtacagagctgaccaggcctctctcagggctaaagattatgag
gtggatgctaccatcaagtccttgaacactcagattgagaatctgctttcccctgagggc
tcaaagaagaaccctgcccgtacttgccgtgacatcaggctcagccaccctgaatggagt
agcggtttctactggattgaccccaaccagggctgcaccatggatgccatcaaggcctac
tgcgacttctctactggccagacctgcatccacccacacccagaaagcatcccacgcaaa
aactggtacagaagttcccaggagaagaaacacatttggttcggcgagaccatcaatggt
ggtactgagttcggttacaatgatgagaccctgagcccacagtccatggctactcagctg
gccttcatgcgtttgctggccaaccaggcagtccagaacatcacctaccactgcaagaac
agcatcgcctacatggatgccgagaatggaaacctgaagaaggctgtgttgctgcagggc
tccaatgatgtggagctcagggcagagggcaacaaccgcttcactttcagcgtcctagag
gatggctgcagtagacacactggccagtggagcaagacagtcattgaatacagaacaaat
aaaccatctcgccttcccatcctcgacattgcacctttggacattggtggcgcagatcaa
gagtttggtttggacattggcccagtctgtttcaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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