KEGG   Sinocyclocheilus grahami (golden-line barbel): 107594447
Entry
107594447         CDS       T04918                                 
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
  KO
K10614  E3 ubiquitin-protein ligase HERC3 [EC:2.3.2.26]
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107594447
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sgh04121]
    107594447
Enzymes [BR:sgh01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.26  HECT-type E3 ubiquitin transferase
     107594447
Ubiquitin system [BR:sgh04121]
 Ubiquitin ligases (E3)
  HECT type E3
   107594447
SSDB
Motif
Pfam: RCC1 HECT RCC1_2
Other DBs
NCBI-GeneID: 107594447
NCBI-ProteinID: XP_016139987
Position
Unknown
AA seq 922 aa
MNDVYQASILESDCVSLIELVRALDAQKIAGVSCGQAHSLAVNEQGQVFAWGAGEGGQLG
LGTAEEAVHVPRLIKKLCEHRISQVMCGNQHCIALSKDGQLFVWGENSSGQLGLGKGEPS
TLSPQTLKSLCGIPLAQISAGGDHSFALSLSGAVFGWGKNSAGQLGLNDEQDRAVPCHIK
FLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSRGQLGHDSTRNEPLPRRVMELMGTEVS
QIACGRHHTLAFVPSTGLVYAFGCNTQGQLGTGLRGNAKSPLPVRNVQPLCIGNTHTKGE
RYTIRKIHSGGDHNFLLLSTKEGSSCPEDFRIMNTIKSIALINSESLDSWRMKLHDNSDS
SITNDILLLFSSTACWNASFLDQSDDGHFKTNPKVPGIDFNAVRLLFETLMKPAFARLLD
QATKSFESLLIPQLTCSPPDVEAMRIYLILSECPALQDSKNYISLTIPLAMAILRLDANP
SKVLDNWWSLMDCEFFSRLVEMYKSIVVFLLTGGKALLMPVFLESYTSAALRLLEKLHKV
NLKAHRVEYNHFYIPDIATLVDIQEDYLKWFLRKADIKMRYPPVQGSVTLCAYPFILNAQ
AKTTVLQTDAELQMQMAVSGANLHNVFMLLTMEPLLARNPFLVLHVRRNHLVSDALRELT
VYNDVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELIDPIYGMFTQYSESNLLWFSDK
VEETFCLNFAITREYYGITEVKELVQGGKTIAVDKTNRKEFVQAYLQYVFSDAVQEQYSA
FSSGFLKVCGGEILSLFQPSELMAMVVGNNNYNWEEMEKNASYKGEFSASHPTVKMFWEV
FHEFPLEKKKQFLLFLTGSDRIPIHGMASLRIVIQSTAAEEHYLPVAHTCYNMLDMPCYQ
TKETLRHRLTQAVEQYEGFSLV
NT seq 2769 nt   +upstreamnt  +downstreamnt
atgaatgatgtctatcaagcatccattctggagagtgattgtgtgtctctcatagagctg
gtaagagctctggatgctcagaagatcgccggtgtgtcgtgtgggcaggctcactctctg
gcggtgaacgagcaggggcaggtgtttgcctggggggccggagaaggagggcagctcggt
ctgggtacggctgaagaggctgtccatgtacccaggttgattaaaaagttgtgcgagcat
cgaatctcacaagtgatgtgtggcaaccaacactgcatagcgctttcaaaagatggtcag
ctgtttgtatggggtgagaactccagcggtcagctgggtttagggaagggagagcccagc
actctgtctcctcaaacactcaaatctctttgtgggatcccactggctcagatcagcgct
ggaggagaccacagctttgccctgtcgctgtctggagccgtgttcggctgggggaagaac
agcgcggggcagctgggcctcaatgacgagcaagaccgggctgttccctgtcacatcaag
ttcctgcgctcacagaaggtggtgtacatcagctgtggagaggagcacaccgctgccttg
acaaaggaagggggtctgttcacatttggaaacggttcaagaggacagctgggccacgat
tccaccagaaacgagcctcttccacgcagagttatggagctcatgggcactgaggtgtct
cagatcgcttgtgggcggcaccacaccctggcattcgtgccctccactggtctggtttac
gctttcggctgcaacactcagggccagctgggtacaggcctcagaggaaatgctaagagc
ccccttcctgtcagaaacgtccagcccctgtgcattggaaatacacacacaaaaggcgag
cgctacaccatccgtaaaattcacagtggaggcgatcacaatttcctgttgttgtctact
aaggagggttcatcttgtcccgaggatttccgcatcatgaataccatcaaaagcatcgct
ctgattaattctgagagtctggacagctggaggatgaagctccatgacaacagcgattca
agcatcaccaatgacatcttactcctgttttcctcaactgcatgttggaatgccagcttt
ttggatcaaagtgatgacgggcatttcaaaaccaaccccaaagtcccaggcatcgatttc
aatgcagttaggctgctttttgagacgctgatgaaaccagccttcgcaagacttttggat
caggccacgaagagctttgagagtctcctgatcccccagctgacctgctctcctcctgac
gtggaagccatgcggatctacctgatcctgtctgaatgtcccgctctccaggactccaaa
aactacatctctctcaccatccctctagccatggccatcctcagactggatgccaacccc
agcaaagtcctcgataactggtggtctctaatggattgcgagtttttctccagactagtg
gagatgtacaaaagcattgttgtgtttctgttgactggcgggaaggcgctcctgatgcct
gtgtttctggagagttacaccagtgccgcccttagactgctggagaagctacacaaggtc
aatctgaaagcccatcgtgtggaatacaaccacttctacatccctgacatcgccaccctg
gtggacatacaggaagactacctcaaatggtttctgcgcaaagctgatattaaaatgcga
taccctccagtgcagggatctgtcacgttatgtgcctatccgttcatattgaacgcgcaa
gccaagacgaccgtgctgcaaacagatgctgagctgcaaatgcagatggcagtaagtggc
gctaacttgcacaacgtcttcatgctgttgactatggaacctttgctggcaagaaaccct
ttcctggtgcttcacgtaagaaggaaccacttagtcagcgatgctctccgggagctcaca
gtctacaatgacgtagacttgaaaaagccacttaaggtcatctttgatggagaggaagct
gtggatgctggaggagtcactaaggagttcttcctgctcctgcttaaagagctgattgat
ccgatctatggcatgttcacccaatattcagagtccaatctgctgtggttctctgataaa
gtagaggagaccttctgtctgaactttgcaattacgagagagtattacgggataacagag
gttaaagagctggtacagggcgggaagaccatcgcagtggacaagacaaacaggaaggag
tttgttcaggcgtatttacagtatgtgttcagtgatgccgtacaggagcagtattcggcc
ttctccagcggtttcctgaaggtctgtggcggggagattctctctctcttccagccctct
gagctcatggccatggtggtgggcaacaacaactacaactgggaggagatggagaagaat
gcctcctacaagggcgagttctctgcatcacacccaacagttaagatgttttgggaggtg
tttcatgagtttcccttggagaaaaagaaacagtttttattgtttttgacaggcagtgac
cgcatccccatccacggcatggccagtctacgcatcgtcatccaatccactgctgcggaa
gagcactaccttcctgtggcccacacctgctataacatgctggacatgccctgctaccag
accaaagagactctgcggcaccggctcacgcaagccgtggagcagtacgagggcttcagt
ctggtctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system