KEGG   Sinocyclocheilus grahami (golden-line barbel): 107603249
Entry
107603249         CDS       T04918                                 
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
  KO
K12811  ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7]
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107603249 (ddx46)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sgh03041]
    107603249 (ddx46)
Enzymes [BR:sgh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     107603249 (ddx46)
Spliceosome [BR:sgh03041]
 Complex A
  U2 snRNP components
   U2 related factors
    107603249 (ddx46)
 Complex B
    107603249 (ddx46)
SSDB
Motif
Pfam: DEAD Helicase_C CdAMP_rec PMI_typeI_cat
Other DBs
NCBI-GeneID: 107603249
NCBI-ProteinID: XP_016151492
Position
Unknown
AA seq 1026 aa
MGRESRHYRKRSGSRSKSRSPDSKRSKKEEQTGSRARERSRRERSRSRERRRSRSRDRKR
PRRSRSRERRRRSRGRSKEKSENTEPCADKKKMKEEKEKEEEKPEDQDFDQNTLEEEMRK
RKERVEKWREEQRKKAMENIGELKKELEEMKQGKKWSLEDDDDDDEETQALVEPDEEEEE
GEKDGSAETEEEAQMEQETGEELDPLDAYMEEVKEEVKKFNMGTMKGGNDKQKGSVSVTK
VVTVVKTKKMVHTTKKKGELMENDQDAMEYSSEEEEVDLQTALTGFQTKQRKVLEPVDHQ
KIEYESFRKNFYVEVPELFRMSPEEVNEYRLELEGIAVKGKGCPKPIKTWVQCGISMKVL
NAMKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHILDQRPVGEAE
GPIAMIMTPTRELALQITKECKKFSKSLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPG
RMIDMLGANNGRVTNLRRATYVVMDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFP
RTMEALARRILSKPIEVQVGGRSVVCSDVEQHVIVIAEEKKFLKLLEILGHYQEKGSVII
FVDKQEHADGVLKDLMKASYPCMSLHGGIDQYDRDSIINDFKNGACRLLVATSVAARGLD
VKQLILVINYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEEQARYAGDIIKALELSGSA
VLPELELLWTNFKEQQKAEGKSIKSSSGFSGKGFKFDETEHVLANERKKLQKAALGLHDS
DDEDAALDIDEQIESMFNSKKRVKDLSAPGGAAGASAVSMSGSLTSVSGLSGPSAPSAGN
IQKLEIAKKLALKIQAQKNLGAEAQDVMQQATNAILRGGTMIAPSVSAKTIAEQQAEKIN
AKLNYTPVEKLEEERQAAEATDTVKRYEEELEINDFPQTARWKVTSKEALQRIGEYSEAA
ITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNSYQPTSK
SRYKVL
NT seq 3081 nt   +upstreamnt  +downstreamnt
atgggacgagagtcgcggcattacaggaagcgctccggctccagatctaagagccgctcg
ccggactccaagcgctcgaagaaggaggagcagacgggatcccgcgcccgcgagcgcagc
cggagagagaggtcacgcagccgagagcgccgcaggtcacgctccagagaccgcaagagg
ccgaggcgctccaggagccgcgagcggaggcgcaggagccgagggaggagcaaggagaag
tctgagaacacagagccctgcgctgacaagaagaagatgaaggaggagaaggagaaggag
gaggagaagcctgaagatcaggactttgaccagaacactctggaggaggagatgaggaag
aggaaggagcgagtggagaagtggagggaggagcagaggaagaaagccatggagaacatc
ggagaactcaagaaggagctggaggagatgaagcaggggaagaagtggagtctggaggac
gacgacgatgacgatgaggagactcaagcgctcgtggagccggacgaagaggaagaggag
ggagagaaagacggatcggctgagacagaggaggaggcacagatggagcaggagaccgga
gaggagctggacccgctggacgcttacatggaggaggtcaaagaggaggtcaagaagttc
aacatgggcaccatgaaaggaggcaacgacaagcagaaaggcagtgtgtctgtgaccaaa
gtggtgaccgttgtgaagacgaagaagatggtgcacaccaccaagaagaaaggagagctg
atggagaacgaccaggacgccatggagtattcatcagaggaagaggaagtggacttgcag
acggccctcacaggctttcagaccaaacagaggaaagttctggagccggttgatcatcag
aagatcgagtacgaatccttccgcaagaacttctatgtggaggtgccagagctgttcagg
atgagccctgaagaggtgaacgagtaccgtctggagctggagggaatcgctgtcaaaggc
aaaggctgtccgaagcccatcaagacgtgggtgcagtgtgggatatccatgaaagtgctg
aacgcgatgaagaaacacaactatgagaagccgacgccgatccaggcccaggccatccca
gccatcatgtcgggacgagacctcatcggcatcgctaaaacaggaagcgggaagaccatc
gccttcctgctgcccatgtttcgccacatcttagaccagcggccggtgggagaggcagaa
ggacccatcgccatgatcatgacgccgacgcgagagctggcgctgcagatcaccaaagag
tgcaagaagttctccaagtctctgggtctgcgtgtggtgtgtgtgtacggcggcaccggc
atcagcgagcagatcgcagagctgaagcgcggcgcagagatcatcgtgtgcactccggga
cgcatgatcgacatgctcggtgctaacaacggtcgcgtgaccaatctgcgcagagccacg
tatgtggtgatggacgaggccgaccggatgttcgacatgggctttgagccgcaggtgatg
cgtatcgtggataacgtgcggcccgaccgacagacggtgatgttctcggccacgttcccg
cgcacgatggaggctctggcgcgcaggatcctgtccaaacccatcgaggtgcaggtggga
ggcaggagcgtggtgtgctcagacgtggagcagcacgtgattgtgatcgcggaggagaag
aagttcctgaagctgctggagattctgggtcactatcaggagaagggctccgtcatcatc
ttcgtggacaagcaggagcacgccgacggcgtcctcaaagacctgatgaaggcctcgtac
ccctgcatgtctcttcacggaggcatcgatcagtacgacagggacagcatcatcaacgac
ttcaagaacggtgcgtgtcgtctgctggtggccacctctgtggcggcgcgaggcctggac
gtcaagcagctgatcctggtgatcaactacagctgtcccaaccactacgaggactacgtg
caccgtgccggacgcaccggccgagccgggaacaagggttacgcgtacaccttcatcact
gaagaacaggctcgttacgccggagacatcatcaaagcgctagagctgtctggatcggcc
gtcctgccggagctcgagctgctctggaccaacttcaaggagcagcagaaagctgagggg
aagagcatcaagagcagcagtggattctccgggaagggctttaagtttgacgagacggag
cacgtgctggctaacgagcggaagaagctgcagaaggctgcgttaggtctgcacgactct
gacgacgaggatgcggctctggacatcgacgagcagatcgagagcatgtttaactctaag
aagcgtgtgaaggatctctctgctccgggcggcgctgcgggagcgtctgcggtcagtatg
agcggatctctgacctctgtgtccggtctgagtggcccgagcgctccgtccgccgggaac
atccagaaactggagatcgctaagaaactggccctcaagatccaggcgcagaagaacctc
ggcgcagaggcacaggatgtgatgcagcaggccacaaacgctatcctgcgcggcgggacg
atgatcgcgccctctgtctcggctaagaccatcgcggagcagcaggcggagaagatcaac
gctaaactgaactacactccggtggagaagctggaggaggagcggcaggccgccgaggcc
acggacaccgtcaagagatacgaggaggagctggagatcaacgacttccctcagacggcg
aggtggaaggtgacgtctaaggaggctcttcagcgcatcggcgagtattccgaggcggcc
atcactatccgaggaacatacttcccaccgggcaaagagcccaaagagggagagcgcaag
atctacctggccatcgagagtgcgaatgaactggccgtgcagaaggccaaagcagaaatc
acacggctgatcaaagaagagctgatccgtctgcaaaactcctaccagcccaccagcaag
agccgatacaaggttctgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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