KEGG   Sphingopyxis granuli: SGRAN_2751
Entry
SGRAN_2751        CDS       T04372                                 
Symbol
cshA2
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
sgi  Sphingopyxis granuli
Pathway
sgi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sgi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SGRAN_2751 (cshA2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sgi03019]
    SGRAN_2751 (cshA2)
Messenger RNA biogenesis [BR:sgi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     SGRAN_2751 (cshA2)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25 CMS1
Other DBs
NCBI-ProteinID: AMG75100
UniProt: A0AA86L4K0
Position
complement(2977952..2979319)
AA seq 455 aa
MEFKDFGLHADIERALTAKRYTQPTPIQSQAIPVLLEGRDLCGIAQTGTGKTAAFSLPSL
DYMLSNPRPRTPRGCRMLVLSPTRELAAQIAQSCRDYGRFTKLSVATVFGGVPINRQIRD
LSQGVDILVATPGRLLDLVDQRALRLDDVEIFVLDEADQMMDMGFIHSLRRVAKILPKQR
QNLFFSATMPKEIAALAQQFLHDPVTVSVAPQATTAEKIRQRVTFVEQKEKQALLHHVLR
SEEIDRALIFTRTKHGADRVVRHLKGAGIDAFAIHGNKSQGQRTTALQAFRSGQVRLLVA
TDIAARGIDVSGVSHVINFEIPNVPEQYVHRIGRTARAGAEGIAISFVAPDERTYLRDIE
RVTRTRAEPVALPDGFTEMVRNLPKPAQPPRNTGGKGRDPQRQREDALRKKADGAPSRGP
RREAAGEGAQPQRKRRFRPRRGGVGAHKGAVQRVG
NT seq 1368 nt   +upstreamnt  +downstreamnt
atggaattcaaagacttcggcctccacgccgacatcgagcgtgcgctgacggccaagcgc
tatacccaaccgacgccgattcagagccaggcgatccccgtcctgctcgaagggcgcgac
ctgtgcggtatcgcgcagaccggcaccggcaagaccgcggccttctcgctgccttcgctc
gactatatgctgtcgaacccgcgcccgcgcactccgcgcggttgccgcatgctcgtcctg
tcgccgacccgcgaactggcggcgcagatcgcgcagagctgccgcgactacggccgtttc
accaagctcagtgttgcgacggtgttcggcggcgtgccgatcaatcgccagattcgcgac
ctgtcgcagggcgtcgacatcctcgtcgcgacgccgggccggctgctcgacctggtcgac
cagcgcgcgctgcgcctcgacgacgttgaaatcttcgtcctcgacgaggccgatcagatg
atggacatgggcttcatccattcgctgcgtcgcgtcgccaagatcctgccgaagcagcgc
cagaatctcttcttctcggcaacgatgccgaaggagatcgcggcgctcgcgcagcagttc
ctgcacgaccccgtcaccgtctcggtggcgccgcaggcgacgaccgcggaaaagatccgc
cagcgcgtcaccttcgtcgagcagaaggagaagcaggcgctgcttcatcatgtcctgcgc
agcgaggagatcgaccgcgcgctgatcttcacgcgcaccaagcatggcgccgaccgtgtc
gttcgccatctgaaaggcgcggggatcgatgcctttgcgatccacggcaacaagagccag
ggacagcgcaccacggcgcttcaggccttccgttcggggcaggtgcggctgctcgtcgcg
accgacatcgcggcgcgcggcatcgacgtgtccggagtcagccacgtcatcaacttcgag
attccgaacgtccccgaacaatatgtccaccggatcggccgcaccgcgcgcgccggggcg
gagggcatcgcgatcagcttcgtcgcgcccgacgagcgcacctatctgcgtgacatcgaa
cgcgtgacgcgaacccgcgccgagccggttgcgctgcccgacggttttacggagatggtc
cgcaacctgcccaagcccgcccagccgccgcgcaataccggcggcaagggccgcgatccg
cagcgccagcgcgaagatgcgctgcgcaagaaggcggacggcgccccgtcgcgcggtccg
cgccgcgaagcggcgggcgagggcgcacagccccagcgcaagcgccgtttccggccgcgt
cgcggcggcgtcggcgcgcacaagggcgcggtccagcgcgtcggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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