KEGG   Streptomyces griseochromogenes: AVL59_04585
Entry
AVL59_04585       CDS       T04729                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
sgs  Streptomyces griseochromogenes
Brite
KEGG Orthology (KO) [BR:sgs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sgs03021]
    AVL59_04585
Transcription machinery [BR:sgs03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AVL59_04585
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r4_2 Sigma70_r2 Sigma70_ECF HTH_16 HD_5 HTH_23 Deltaretro_Tax GerE
Other DBs
NCBI-ProteinID: ANP48945
UniProt: A0A1B1AQW2
Position
950514..951101
AA seq 195 aa
MRDDEAGTAHGAIGALVHRAVDGDEQATHDLLAHVHPLALRYCRTRLSRLPGDARHFVED
LAQEVCVAVLLALPRYRDTGRPFEAFVFAIASHKVADLQRAAMRHPGSTAVPSDEMPERP
DDSLGPEERALLSSDAEWAKKLLANLPENQRELLLLRIAVGLTAEETGQMLGMSPGAVRV
AQHRALSRLRALAEQ
NT seq 588 nt   +upstreamnt  +downstreamnt
atgcgcgacgacgaggcgggcacggcccacggggcgatcggtgccctcgtgcatcgtgcc
gtcgacggggacgagcaggccacgcacgatctgctcgcccatgtccaccctttggcgctg
cgctactgccgcacccggctgtcccggctgcccggcgacgcgcgccacttcgtcgaggac
ctcgcccaggaggtctgtgtggcggtcctcctcgccctgccgcgctaccgcgacaccggc
cgccccttcgaggccttcgtcttcgccatcgcctcgcacaaggtcgccgacctccagcgc
gccgcgatgcgccacccgggctccacggccgtcccctcggacgagatgcccgaacggccc
gacgactccctcggccccgaggagcgcgcgctgctcagcagcgacgccgagtgggccaag
aagctgctggccaacctccccgagaaccagcgcgaactgctcctgctgcgcatcgccgtg
ggcttgaccgcggaggagacggggcagatgttgggaatgtcacccggcgcggtccgtgtg
gcccagcaccgggcgctgagtcgcctcagagcactcgccgaacagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system