KEGG   Streptomyces griseochromogenes: AVL59_35310
Entry
AVL59_35310       CDS       T04729                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
sgs  Streptomyces griseochromogenes
Brite
KEGG Orthology (KO) [BR:sgs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sgs03021]
    AVL59_35310
Transcription machinery [BR:sgs03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AVL59_35310
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_24 HTH_23
Other DBs
NCBI-ProteinID: ANP54140
UniProt: A0A1B1B5Q6
Position
complement(8150535..8151077)
AA seq 180 aa
MEADELLVLVAGGDQRAFEDLYTLVSGPVFGLVRRVVRDPAQSEEVAQEVLLELWRSAAR
FDPRRGSALSWILTLAHRRAVDRVRSARAAGEREQREALRAGEPAFDHVAEEVEAGLERE
WVRRCLDRLTALQRQSVTLAYYDGYTYREVAERLKLPLGTVKTRMRDGLTRLRECLGGAA
NT seq 543 nt   +upstreamnt  +downstreamnt
gtggaggcggacgagcttctggtgctcgtggcgggcggcgatcaaagggccttcgaggat
ctctacacactggtctccggaccggtgttcgggctcgtacggcgcgtggtgcgcgacccc
gcccagtccgaggaggtcgcccaggaggtgctgctcgaactgtggcgctccgccgcccgg
ttcgacccccgtcggggcagcgcgctgtcgtggatcctcaccctcgcccaccgtcgcgcc
gtcgaccgggtgcgcagcgcccgcgccgccggcgaacgcgagcagcgcgaggccctgcgc
gccggggaacccgccttcgaccatgtcgccgaggaggtggaggcgggcctggaacgcgag
tgggtgcgccgctgcctggaccggctcaccgccctgcagcgccagtccgtgaccctcgcc
tactacgacggctacacgtaccgtgaggtggccgagcggctcaagctgccgctgggcacg
gtcaagacgcggatgcgcgacggactcacccggctgcgcgagtgcctgggaggtgccgca
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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