KEGG   Streptomyces griseochromogenes: AVL59_36640
Entry
AVL59_36640       CDS       T04729                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
sgs  Streptomyces griseochromogenes
Pathway
sgs03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sgs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AVL59_36640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sgs03400]
    AVL59_36640
DNA repair and recombination proteins [BR:sgs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AVL59_36640
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AVL59_36640
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 AAA_21 AAA_16 RsgA_GTPase nSTAND1 AAA_33 AAA_22 APS_kinase DnaJ_CXXCXGXG NACHT Viral_helicase1 cobW HTH_5
Other DBs
NCBI-ProteinID: ANP56998
UniProt: A0A1B1BDU8
Position
complement(8447489..8450515)
AA seq 1008 aa
MADRLIVRGAREHNLKNVSLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARIGKPH
CPECGRPISRQSPQAIVDKVLELPEGSRFQVLSPLVRERKGEFVDLFADLQTKGYSRARV
DGETIQLSDPPALKKQEKHTIEVVVDRLTVKDSAKRRLTDSVETALGLSGGMIVLDFVDL
PEDDPERERMYSEHLYCPYDDLSFEELEPRSFSFNSPFGACPECTGIGTRMEVDPELIVP
DEDKSLDEGAIHPWSHGHTKDYFGRLIGALADALGFRTDIPFAGLPQRAKKALLHGHKTQ
IEVRYRNRYGRERVYTTPFEGAVPFVKRRHSEAESDASRERFEGYMREVPCPSCEGSRLK
PIVLAVTIMEKSIAEVSAMSISDCADFLGELKLNARDKKIAERVLKEVNERLRFLVDVGL
DYLSLNRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRLR
DMGNTLIVVEHDEDTIKVADWIVDIGPGAGEHGGKVVHSGSLKELLGNDESQTGQYLSGK
KSIPLPDIRRPQDPSRRLTVHGARENNLQDIDVSFPLGVFTAVTGVSGSGKSTLVNDILY
THLARELNGARNVPGRHTRVDGDDLVDKVVHVDQSPIGRTPRSNPATYTGVFDHIRKLFA
ETTEAKVRGYLPGRFSFNVKGGRCENCAGDGTIKIEMNFLPDVYVPCEVCHGARYNRETL
EVHYKGKSIADVLNMPIEEATDFFEAVPAISRHLRTLKDVGLGYVRLGQSATTLSGGEAQ
RVKLASELQKRSTGRTVYVLDEPTTGLHFEDISKLLKVLSGLVDKGNTVIVIEHNLDVIK
TADWIVDMGPEGGAGGGLVVAEGTPEQVAGVPASHTGKFLRDVLGADRISDAEPVKAPRG
TAVRKTAAAKSTAKRTVTAKANNTATKKAATATKKAAPAKKTTRARKA
NT seq 3027 nt   +upstreamnt  +downstreamnt
gtggccgaccgtctcatcgtccgtggcgcgcgcgagcacaacctgaagaatgtctcgctc
gacctgcctcgcgactcgctcatcgtcttcacgggcctgtccgggtcgggcaagtcctct
ctggccttcgacacgatcttcgccgaggggcagcgccggtacgtggagtcgctctcctcg
tacgcccggcagttcctcggccagatggacaagcccgacgtcgacttcatcgagggtctg
tccccggcggtctccatcgaccagaagtcgacctcgcgcaacccgcgctcgacagtcggc
accatcaccgaggtctacgactacctgcgtctgcttttcgcgcgtatcggcaagccgcac
tgtcccgagtgcggccgccccatctcgcgccagtcgccgcaggccatcgtcgacaaggtc
ctggagctgccggaggggagccgcttccaggtgctgtcgccgctcgtgcgcgagcgcaag
ggcgagttcgtcgatctcttcgcggacctccagaccaagggctactcgcgcgcgcgtgtg
gacggcgagaccatccagctgtccgacccgcccgccctgaagaagcaggagaagcacacc
atcgaggtggtcgtcgaccgcctcacggtgaaggactccgccaagcgccgtctcaccgac
tccgtggagactgccctcggcctgtccggcggcatgatcgtgctcgacttcgtggacctc
ccggaggacgaccccgagcgcgagcgcatgtactcggagcacctgtactgcccgtacgac
gacctgtccttcgaggagctggagccccgctccttctccttcaactcgcccttcggcgcc
tgccccgagtgcaccggcatcggcacgcgcatggaggtcgacccggagctgatcgtcccg
gacgaggacaagtccctggacgagggcgccatccatccctggtcgcacgggcacaccaag
gactacttcggccgcctgatcggcgccctcgcggacgccctgggcttccggacggacatc
cccttcgccggtctgccgcagcgcgccaagaaggccctgctccacggccacaagacccag
atcgaggtccggtaccgcaaccggtacggccgcgagcgcgtctacaccacgcccttcgag
ggcgcggtgccgttcgtcaagcgccggcacagcgaggccgagagcgacgccagccgcgag
cgcttcgagggctacatgcgggaggtcccctgcccctcctgcgagggcagccgcctgaag
ccgatcgtcctcgccgtcacgatcatggagaagtcgatcgccgaggtctccgcgatgtcg
atcagcgactgcgcggacttcctgggcgagctgaagctcaacgcccgcgacaagaagatc
gccgagcgggtcctcaaggaggtcaacgagcggctgcggttcctggtcgacgtcggcctc
gactacctctccctcaaccgcgcggccggcaccctctccggcggcgaggcgcagcgcatc
cgcctggccacccagatcggctccggcctcgtcggcgtcctgtacgtcctggacgagccc
tccatcggtctgcaccagcgggacaaccaccggctgatcgagaccctggtccggctgcgc
gacatgggcaacacgctcatcgtggtggagcacgacgaggacaccatcaaggtcgccgac
tggatcgtcgacatcggccccggcgccggtgagcacggcggcaaggtcgtgcacagcggc
tccctgaaggagctgctcggcaacgacgagtcgcagaccggtcagtacctgtccggcaag
aagtccatcccgttgccggacatccgccgcccgcaggacccgtcccgccggctcaccgtg
cacggcgcccgtgagaacaacctccaggacatcgatgtgtccttccctctgggtgtgttc
acagccgtcacgggcgtgtccggctccggcaagtcgacgctggtcaacgacatcctctac
acgcacctggcccgcgagctgaacggtgcgcgcaacgtccccggacggcacacgcgcgtg
gacggcgacgacctcgtcgacaaggtcgtccacgtcgaccagtcgcccatcggccgcacc
ccgcggtccaacccggccacctacaccggcgtcttcgaccacatccgcaagctgttcgcc
gagaccaccgaggcgaaggtccgcggctacctgcccggccgcttctccttcaacgtcaag
ggcggccgctgcgagaactgcgcgggcgacggcacgatcaagatcgagatgaacttcctc
ccggacgtctacgtcccgtgcgaggtctgccacggcgcccggtacaaccgggagaccctg
gaggtccactacaagggcaagtccatcgccgacgtgctgaacatgccgatcgaggaggcg
accgacttcttcgaggccgtcccggccatctcccggcacctgaggacgctgaaggacgtc
ggcctcggctacgtccggctcggccagtccgcgaccaccctgtccggcggtgaggcgcag
cgcgtgaagctcgccagcgaactgcagaagcgctccaccggacgcaccgtctacgtcctg
gacgagcccaccaccggtctgcacttcgaggacatcagcaagctgctcaaggtcctgtcc
ggtctggtcgacaagggcaacacggtcatcgtcatcgagcacaacctcgatgtgatcaag
accgccgactggattgtcgacatgggcccggagggcggcgccggcggtggcctcgtggtc
gccgagggcacgcccgagcaggtcgccggggtcccggccagtcacacgggcaagttcctg
cgcgacgtcctcggtgccgaccgcatcagcgacgcggaaccggtgaaggcgccgcgcggc
acggcggtcaggaagacggcggccgccaagtcgacggcgaagaggacggtgacggccaag
gccaacaacacggcgaccaagaaggccgccacggccacgaagaaggcggcacccgcgaag
aagacgacgcgggcccgcaaggcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (25)   

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