KEGG   Staphylococcus haemolyticus JCSC1435: SH1856
Entry
SH1856            CDS       T00250                                 
Symbol
pdhD
Name
(GenBank) dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sha  Staphylococcus haemolyticus JCSC1435
Pathway
sha00010  Glycolysis / Gluconeogenesis
sha00020  Citrate cycle (TCA cycle)
sha00260  Glycine, serine and threonine metabolism
sha00280  Valine, leucine and isoleucine degradation
sha00310  Lysine degradation
sha00380  Tryptophan metabolism
sha00620  Pyruvate metabolism
sha00630  Glyoxylate and dicarboxylate metabolism
sha00640  Propanoate metabolism
sha00785  Lipoic acid metabolism
sha01100  Metabolic pathways
sha01110  Biosynthesis of secondary metabolites
sha01120  Microbial metabolism in diverse environments
sha01200  Carbon metabolism
sha01210  2-Oxocarboxylic acid metabolism
sha01240  Biosynthesis of cofactors
Module
sha_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sha_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sha_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sha_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sha00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    SH1856 (pdhD)
   00020 Citrate cycle (TCA cycle)
    SH1856 (pdhD)
   00620 Pyruvate metabolism
    SH1856 (pdhD)
   00630 Glyoxylate and dicarboxylate metabolism
    SH1856 (pdhD)
   00640 Propanoate metabolism
    SH1856 (pdhD)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SH1856 (pdhD)
   00280 Valine, leucine and isoleucine degradation
    SH1856 (pdhD)
   00310 Lysine degradation
    SH1856 (pdhD)
   00380 Tryptophan metabolism
    SH1856 (pdhD)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    SH1856 (pdhD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sha04147]
    SH1856 (pdhD)
Enzymes [BR:sha01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     SH1856 (pdhD)
Exosome [BR:sha04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   SH1856 (pdhD)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored GIDA HI0933_like FAD_binding_2 NAD_binding_8 FAD_binding_3 DAO AlaDh_PNT_C 3HCDH_N UDPG_MGDP_dh_N Thi4 Lycopene_cycl
Other DBs
NCBI-ProteinID: BAE05165
NITE: SH1856
UniProt: Q4L5B0
Position
complement(1903895..1905301)
AA seq 468 aa
MVVGDFPIETDTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLH
ASHRFVEAQHSENLGVIAESVSLKFDKVQEFKKSVVNKLTGGVEGLLKGNKVEIVKGEAY
FVDNNSLRVMDEKSAQTYNFKHAIIATGSRPIEIPNFEFGKRVIDSTGALNLQEVPGKLV
VVGGGYIGSELGTAFANFGSDVTILEGAKEILGGFEKQMVQPVKKGMKEKGVEIITEAMA
KNAEETENGVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGLKFADRGLLEVDK
QSRTSIDNIYAIGDIVPGLPLAHKASYEAKVAAEAISGQASEVDYIGMPAVCFTEPELAQ
VGYTEAQAKEEGLDYKASKFPYAGNGRALSLDDTTGFVKLITLKEDDTVIGAQIAGNGAS
DIISELGLAIEAGMNAEDIALTVHAHPTLGEMSMEAAEKAIGMPIHTM
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggtagttggagatttcccaattgaaacagatactattgtaatcggagcaggtcctggt
ggatatgttgcagcaattcgcgcagcacaattaggacaaaaagttactatcgttgagaaa
ggtaacttaggtggtgtatgcttaaacgttggttgtattccttcaaaagcattattacac
gcttcacaccgctttgtagaagctcaacactctgaaaacctaggtgttatcgctgaaagc
gtatcacttaaattcgacaaagttcaagaattcaaaaaatcagttgtaaacaaattaact
ggtggtgttgaaggcttattaaaaggtaataaagttgagattgtaaaaggtgaagcttat
ttcgttgataataacagcttacgcgttatggatgaaaaaagtgcacaaacttacaatttc
aaacacgctattatcgcaacaggttctagaccaattgaaattcctaactttgaatttggt
aaacgtgttatcgattcaacaggtgcattaaacttacaagaagttccaggtaaattagtc
gttgtaggtggcggttacattggttcagaacttggtacagcatttgctaactttggttca
gacgttacaattttagaaggcgctaaagaaattcttggcggattcgaaaaacaaatggtt
caaccagttaaaaaaggcatgaaagaaaaaggcgttgaaatcattactgaagcaatggct
aaaaatgctgaagaaactgaaaatggcgttaaagttacttatgaagctaaaggtgaagaa
aaaactatcgaagctgattatgtattagtaactgttggtcgtcgtccaaacacagacgaa
ttaggtttagaagagttaggacttaaattcgcagatcgtggattattagaagtagataaa
caaagccgtacttctatcgacaatatttatgcaattggtgatatcgttcccggtttacca
cttgctcataaagcaagttatgaagctaaagtagctgctgaagctatctctggtcaagca
tcagaagtagactacatcggtatgccagctgtatgtttcactgaaccagaattagctcaa
gtaggttacacagaagcacaagctaaagaagaaggtttagactacaaagcttctaaattc
ccttatgctggtaacggccgtgctttatcattagatgatacaactggtttcgttaaactt
atcacacttaaagaagacgatactgttatcggtgcacaaattgccggtaatggcgcttca
gatatcatttctgaattaggtttagctatcgaagctggtatgaatgctgaagatatcgca
ttaacagtacatgctcacccaacattaggtgaaatgtctatggaagctgctgaaaaagca
attggaatgccaatccacacaatgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (86)   

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