KEGG   Salmonella enterica subsp. enterica serovar Heidelberg B182: SU5_03869
Entry
SU5_03869         CDS       T02011                                 
Name
(GenBank) DNA-binding protein Fis
  KO
K03557  Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
shb  Salmonella enterica subsp. enterica serovar Heidelberg B182
Brite
KEGG Orthology (KO) [BR:shb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:shb03000]
    SU5_03869
   03036 Chromosome and associated proteins [BR:shb03036]
    SU5_03869
   03400 DNA repair and recombination proteins [BR:shb03400]
    SU5_03869
Transcription factors [BR:shb03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    SU5_03869
Chromosome and associated proteins [BR:shb03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    SU5_03869
DNA repair and recombination proteins [BR:shb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      SU5_03869
SSDB
Motif
Pfam: HTH_8 Phage_NinH Inhibitor_I24 HTH_30 HTH_28
Other DBs
NCBI-ProteinID: AFH47191
Position
4228661..4228957
AA seq 98 aa
MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQ
PLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN
NT seq 297 nt   +upstreamnt  +downstreamnt
atgttcgaacaacgcgtaaattctgacgtactgaccgtttctaccgttaactctcaggat
caggtaacccaaaaacccctgcgtgactcggttaaacaggcactgaagaactattttgct
caactgaatggtcaggacgttaatgacctgtatgagctggtactggctgaagtagaacag
cccctgttggacatggtgatgcaatacacccgtggtaaccagacccgtgctgctctgatg
atgggcatcaaccgtggtacgctgcgtaaaaaattaaaaaaatacggcatgaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system