KEGG   Sulfuritalea hydrogenivorans: SUTH_03470
Entry
SUTH_03470        CDS       T03591                                 
Name
(GenBank) RNA polymerase, sigma 54, sigma N factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
shd  Sulfuritalea hydrogenivorans
Pathway
shd02020  Two-component system
shd02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:shd00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    SUTH_03470
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    SUTH_03470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:shd03021]
    SUTH_03470
Transcription machinery [BR:shd03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SUTH_03470
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38 HTH_IclR Sigma70_r4
Other DBs
NCBI-ProteinID: BAO31240
UniProt: W0SKB6
Position
3643942..3645393
AA seq 483 aa
MRQGLQLRLSQHLALTPQLQQSIRLLQLSTLELNAEIDQALQDNPLLERDEPEEPAFNPS
ADALATPQTVTPTDSDERLEPRGGDDEGWGMDFSGSHGQRDPNDDDLDSGESQAASVSLR
EHLGEQLAMTQLPDRERALAGFLIEALNDDGYLTQPLDELIDLLVADEDGNGEVREALLE
ELGIALRHLQNLDPPGIGARNAQECLALQLNCLPPCATRSLALAIVADHLDHLAARDFAR
IKKSLGCDDDELRLAQTLIRSLNPRPGAQYAPVDTRYVVPDVSVKKLHGQWIVSLNRDAM
PRLRINRLYADILNRHRGGNGSSTGLATQLQEAKWLIKNVQQRFDTILRVSQAIVDRQRA
FFDHGEVAMRPLTLREIAETVKLHESTISRVTTQKYLASPRGVYELKYFFGSHVATDTGG
AASSTAIRALIKQLVGAEDGKKPLSDARLAEILGEQGIVVARRTVAKYRELLGIPPVNLR
KAL
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgaggcagggactccagctcaggctctcgcagcatctggcactgacgccgcagttgcag
cagtcgatcaggctgttgcagttgtcgacgctggaactcaatgccgagatcgatcaagcc
ctgcaggacaatcccctgctggagcgcgacgaacccgaagagccggctttcaatccctcg
gcagatgcgctggcgacgccgcagaccgtcacgccgaccgacagcgacgaacgcctggag
ccgcgcggcggcgatgatgaaggttggggcatggatttttccggcagccacggccagcgc
gatcccaacgatgacgacctcgacagcggcgaatcccaggccgcgtccgtttcgctgcgc
gagcatctgggcgaacagctggccatgacccagttgcccgaccgcgaacgggcgctggcc
ggatttctgatcgaagccctgaacgacgacggctacctgacgcagccgctggacgaattg
atcgacctgctggtcgccgacgaagatggcaatggcgaagtgcgcgaggcgctgctggaa
gaactcggcatcgccctgcgccatttgcagaacctcgatccgccgggcatcggcgcgcgc
aatgcgcaggaatgcctggcgctgcaactcaactgcctgccgccttgcgcgacccgcagc
ctggcgctggccatcgttgccgatcatctcgaccacctcgctgcgcgcgactttgcgcgc
atcaaaaagtcgctgggctgcgacgacgacgaactgcgcctcgcgcaaaccctgatccgc
tcgctgaatccgcgccccggcgcgcagtacgcgccggtcgatacgcgctatgtggtgccc
gacgtatcggtgaaaaagctgcatggacaatggatcgtcagcctcaaccgcgacgccatg
ccgcgcctgcgcatcaaccgcctctacgccgacatcctgaaccgccatcgtggcggtaac
ggctcgtccaccgggctcgccacccagttgcaggaagccaagtggctgatcaagaatgtc
cagcagcgcttcgacaccatcctgcgcgtatcgcaggccatcgtcgatcgccagcgggcc
ttcttcgaccacggcgaagtggcgatgcggccgctgaccctgcgcgagatcgcagagacc
gtcaagcttcacgaatcgacgatttcgcgcgtgacgacgcagaagtatctggccagtccg
cgcggcgtctatgaactcaaatacttttttggcagccacgtcgccaccgataccggcggc
gcggcttcctcaaccgcaattcgggcgctgatcaagcaattggtcggcgccgaggacggc
aagaagccgctctcggatgcccgtcttgcggaaatcctcggcgagcagggcatcgtcgtg
gcacgtcgcaccgtagcgaagtaccgcgaactgctcggcataccgccggtcaacctcaga
aaagcactctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (22)   

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