KEGG   Shewanella sp. MR-4: Shewmr4_0624
Entry
Shewmr4_0624      CDS       T00388                                 
Name
(GenBank) penicillin-binding protein 1B
  KO
K05365  penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
Organism
she  Shewanella sp. MR-4
Pathway
she00550  Peptidoglycan biosynthesis
she01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:she00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Shewmr4_0624
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:she01003]
    Shewmr4_0624
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:she01011]
    Shewmr4_0624
Enzymes [BR:she01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.28  peptidoglycan glycosyltransferase
     Shewmr4_0624
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     Shewmr4_0624
Glycosyltransferases [BR:she01003]
 Polysaccharide
  Bacterial polysaccharide (excluding LPS)
   Shewmr4_0624
Peptidoglycan biosynthesis and degradation proteins [BR:she01011]
 Peptidoglycan biosynthesis and degradation
  Glycosyltransferase/DD-Transpeptidase (Class A PBP)
   Shewmr4_0624
SSDB
Motif
Pfam: Transgly Transpeptidase UB2H
Other DBs
NCBI-ProteinID: ABI37704
Position
722630..724924
AA seq 764 aa
MTTKTTKKAKAKRSRGLLGQMWSLTWKLALIGLAVVTFYSIYLDQIIARKFEGQKWHLPA
QVFSRSMALYPGAAVSHPQLMAELKLLGYRKVANPREVGEFSASSTKIELWRRPFLHPEG
DQAEQRVMISFDSDGISSIARMSDKRQLAIFHLEPVLLDRIIAGDGEDRLFVPTEEMPKA
IVKALLLVEDRSFYEHHGVNPFAILRAAFVNISAGRTVQGGSTLTQQLAKNFFLSSERSL
LRKIREALMAVIIDFRYSKEEILEAYLNEVYMGQDKSRAVHGMGLASQFYFGRPIGELTT
AQQAFLVAAIKGPSYYNPWRYPERSQERRDLVLRLLMEAGELSTAQYKVAVESPLGLRNA
NKPVHQKLPAFYALVKQELNERYGDALLKQSGVKIYTTLDPMAQEAAEIAVTQTFKSLDK
GNKSLQIGMVVTDKYTGGIAAMVGDKTPGFDGYNRAVEIRRPIGSLVKPFVYATALAPNS
QFTLASPLKDQPITLKNEQGKTWSPQNFDKKFSGQVSLLTALKKSMNVPTVNLGIAVGVD
AVATTLAKSGWQEPLNEYPSMLLGAVNGSPLMVAQVYQTLADSGAYRKLTTVTAVLDSHN
QPLPVTRSPKEQAITPDTDFLVQYAMQQVVRSGTATRLGNAFPGVALAGKTGTSNDSRDS
WFAGFDERNVAAIWVGRDDNGKTSLYGSSGAMAVYQAFLKERPPIGLRSIPPTGVIQGYF
DRDTGEAKEAGCRNTEALPALRGTYNPAKNCGEPLQWWQKILGQ
NT seq 2295 nt   +upstreamnt  +downstreamnt
atgacaactaagacgacaaaaaaagcgaaagcgaagcgcagccgtggcctgttagggcaa
atgtggtcgctcacttggaaactagccttaatcggcctagccgttgtgaccttctacagt
atttacctcgatcaaattattgcccgcaagtttgaggggcaaaaatggcacttacccgcg
caggtatttagccgctcgatggccttatatcccggcgctgccgtaagtcatccacagtta
atggccgaactcaaactcttaggttatcgcaaagttgccaatccccgtgaggtcggtgag
ttctcggcatccagcaccaaaatcgaattatggcgtcgtcccttcttacatcctgagggc
gatcaggccgagcagcgggtgatgattagcttcgacagcgatgggatcagctcgattgcg
cgtatgtcagataagcgccagttggcgatattccatttagaacctgtcttgctcgaccgc
attattgcgggtgacggcgaagacagattgtttgtccccacagaagaaatgcccaaggcg
attgtaaaagccttgctgctggtggaagaccgcagtttttacgagcatcacggggtcaac
cccttcgcgattctgcgcgccgcttttgtgaatatcagtgcggggcgaactgtgcagggc
ggctcgacactcacccagcagttggcgaaaaacttcttcctctcgagcgaacgctctttg
ctgcgtaaaattcgcgaagccttaatggcggtgattatcgattttcgttatagcaaggaa
gaaatcctcgaggcctacctcaacgaagtgtatatggggcaagataaatcccgcgccgtg
catgggatggggctggcttcacagttctattttggtcgacccatcggcgagctaaccacg
gcgcagcaagcgtttttagtggcggcgattaagggaccttcctattacaacccatggcgt
tatcctgagcgcagccaagagcgtcgcgatttagtgctgcgtctcttgatggaagcgggt
gaactgagcaccgcgcaatacaaggtggcggtagagtcgcccttaggcttacgtaacgcc
aataaaccagtgcatcaaaagctacctgcattttatgccttggttaaacaagagcttaac
gagcgctatggtgatgcgttattaaaacaatctggagtgaagatttacaccacactcgat
ccaatggcgcaggaagccgccgaaatcgccgtgactcaaacctttaagagcttagataaa
ggcaataagtcgttgcagattggtatggtggttacagacaaatacactggcggtatcgca
gctatggtcggtgataagacgccaggctttgatggttataaccgcgcggttgagatccgc
agacccataggctcgctcgtcaagccatttgtgtatgcgaccgcattggcaccgaatagc
cagtttaccttggcttcgccacttaaagatcagccgattaccctaaagaatgagcagggc
aaaacttggtcaccgcagaactttgataagaagtttagcggacaagtctcgttattaacg
gcgctgaaaaagtcgatgaacgtacctacggtgaacctcgggattgccgtgggggtggat
gcggtggcaaccacactagcgaaatctggctggcaagagccgcttaacgaatacccctct
atgttattgggcgccgtgaatggttcgcccttgatggtggcgcaggtttatcagacactg
gccgatagtggcgcctatcgtaaactcactacggtcacggcggtgctcgatagtcacaat
cagccattacctgttacacgctcaccgaaggagcaagccattacgccggatactgatttc
ttggtgcaatatgctatgcagcaagtggtgcgctcgggtacggcaacacgtttaggcaat
gccttcccaggcgtagcactggcgggtaaaaccggtaccagtaacgatagccgcgactct
tggttcgcgggttttgatgagcgtaacgtcgcggcgatttgggtcggacgcgacgataac
ggcaagaccagcctctacggtagcagtggcgcgatggcggtgtatcaagccttcttgaag
gagcgtccaccgattgggctacgctcgattccgccaacgggcgtgatccaaggttacttt
gaccgtgataccggtgaagctaaggaggcgggatgccgcaataccgaggcattgccagcc
cttagaggtacctataatcctgcgaaaaactgcggtgagccgttgcagtggtggcagaag
attttaggtcagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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