KEGG   Shewanella sp. MR-4: Shewmr4_1810
Entry
Shewmr4_1810      CDS       T00388                                 
Name
(GenBank) integration host factor, alpha subunit
  KO
K04764  integration host factor subunit alpha
Organism
she  Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:she00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:she03032]
    Shewmr4_1810
   03036 Chromosome and associated proteins [BR:she03036]
    Shewmr4_1810
   03400 DNA repair and recombination proteins [BR:she03400]
    Shewmr4_1810
DNA replication proteins [BR:she03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Shewmr4_1810
Chromosome and associated proteins [BR:she03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    Shewmr4_1810
DNA repair and recombination proteins [BR:she03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      Shewmr4_1810
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2
Other DBs
NCBI-ProteinID: ABI38884
UniProt: Q0HJ83
Position
2150040..2150336
AA seq 98 aa
MALTKAEMAEHLFETLGINKRVAKEMVESFFEEIRGALESGEQVKLSGFGNFDLRDKNQR
PGRNPKTGEDIPISARRVVTFRPGQKLKTRVEASNAGK
NT seq 297 nt   +upstreamnt  +downstreamnt
atggcacttaccaaagccgaaatggcagaacatctttttgaaacactaggtattaacaag
cgtgtcgccaaagagatggttgagtcgttctttgaagaaattcgaggcgcacttgaaagt
ggtgagcaggtcaagttatctggctttggcaactttgaccttagggataagaatcaaaga
ccgggaaggaacccaaaaacaggcgaggatatcccgatttccgctcgccgtgtcgtgacc
ttccgtcccggccagaaactgaaaactcgcgtagaagcatctaacgcgggcaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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