KEGG   Shewanella sp. WE21: CKQ84_02240
Entry
CKQ84_02240       CDS       T05404                                 
Name
(GenBank) RNA polymerase subunit sigma-24
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
shew  Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:shew00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:shew03021]
    CKQ84_02240
Transcription machinery [BR:shew03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CKQ84_02240
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4
Other DBs
NCBI-ProteinID: AVI64797
UniProt: A0A2R3EQG4
Position
complement(540598..541203)
AA seq 201 aa
MALAIAQLSNHEHSDEQLMLCYAKGDSKAFEQLYLKHKGALYRYFVRQLGDKQLAEDLYQ
ETWGRVIRAAANYEASAKFTTWLYRIAHNLLIDHVRAVKPVDLVATDEDDAGLDTFVAGE
QDKPDVQWQEAQKSLLLKTCIALLPQVQKEAFILNIEMGFTAAIISDIAGVTLEATKSRI
RYAYQSLKDCVSAKWQEAGHE
NT seq 606 nt   +upstreamnt  +downstreamnt
gtggcattagcaatagcgcaattatcaaaccatgagcactcagatgagcaattgatgttg
tgctatgccaagggcgattcaaaagcatttgaacagttatacctgaagcacaaaggtgca
ctctatcgctactttgtacgccagttaggtgataagcagttagctgaagatttgtatcaa
gaaacctgggggcgagtgatccgcgctgcggctaactacgaagccagtgctaagtttact
acctggttgtatcgtatcgctcataacttattgattgatcatgtacgggcggttaagccc
gtggatttagtcgctactgatgaagatgatgcaggactcgatacttttgtggcgggtgag
caagataaacccgatgtgcagtggcaagaagcgcaaaagagcttattgctaaagacctgt
atcgcactgttaccccaagttcagaaagaggcatttatcctgaatattgaaatgggtttt
acggctgccatcattagcgacattgcgggcgtgaccttagaagcgactaaaagccgtatt
cgttatgcttaccaaagcctaaaagattgtgtcagcgcgaaatggcaggaggcgggtcat
gagtaa

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