KEGG   Shewanella sp. FDAARGOS_354: CEQ32_09310
Entry
CEQ32_09310       CDS       T04944                                 
Name
(GenBank) RNA pyrophosphohydrolase
  KO
K08311  putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
shf  Shewanella sp. FDAARGOS_354
Pathway
shf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:shf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CEQ32_09310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shf03019]
    CEQ32_09310
Messenger RNA biogenesis [BR:shf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     CEQ32_09310
SSDB
Motif
Pfam: NUDIX NUDIX_4
Other DBs
NCBI-ProteinID: ASF15164
Position
complement(2061098..2061622)
AA seq 174 aa
MIDSDGFRANVGIIICNRYGQVMWARRFGQHSWQFPQGGVDDGESAEEAMYRELYEEVGL
KPEHVTILTSTRSWLRYRLPKRLVRQDSKPVCIGQKQKWFLLQLKSQDSAINLSSSGHPE
FDDWRWVSYWYPVRQVVSFKRDVYRKVMKEFAVTALSFQTQEIPRKRVRQKTTG
NT seq 525 nt   +upstreamnt  +downstreamnt
gtgattgatagcgacggctttcgcgcaaatgtgggcataataatttgtaacagatatggc
caagtcatgtgggccagacggtttggacaacactcatggcagtttcctcagggcggtgta
gatgatggtgaatcggccgaagaggctatgtaccgtgaattgtatgaggaagttggctta
aaacccgagcatgtcactatattaacctcgacgcgctcttggctaagataccgtttacct
aaacgcttagtgagacaggacagtaagcctgtgtgtattggccaaaagcaaaagtggttt
ctgttacaactaaaaagccaagatagtgcgattaatttaagttcttcaggccaccctgag
tttgacgattggcgctgggtaagttattggtatccggtgcggcaggttgtctcatttaag
cgtgatgtttatcgtaaggtcatgaaagaatttgcggtaacggcattgtcattccaaacc
caggaaataccgaggaagcgggtaagacaaaagacaacgggctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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