KEGG   Sphingobacterium sp. 21: Sph21_4521
Entry
Sph21_4521        CDS       T01450                                 
Name
(GenBank) exodeoxyribonuclease III Xth
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
shg  Sphingobacterium sp. 21
Pathway
shg03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:shg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Sph21_4521
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shg03400]
    Sph21_4521
Enzymes [BR:shg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     Sph21_4521
DNA repair and recombination proteins [BR:shg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     Sph21_4521
SSDB
Motif
Pfam: Exo_endo_phos HTH_53
Other DBs
NCBI-ProteinID: ADZ81038
UniProt: F4C676
Position
complement(5417260..5418039)
AA seq 259 aa
MKIATYNVNGVNGRLPVLLRWLEEAKPDVVCLQELKAPQEKFPEQAIREAGYNVIWHGQK
SWNGVAILARHLDIIEFGRVLPGDPEDTHSRYIEASINNIHIGCLYLPNGNPVPGPKFDY
KLKWLQRLANHAQELLNKNIPVILTGDYNVIPTELDVYKPERWVDDALFRPEVRMAFSDL
MTQGWTDAIRQLYPNERIYTFWDYFRNAYGRDAGLRIDHFLLSPQLVEKLVAAGVDRYVR
GWEKTSDHAPVWIELRDLP
NT seq 780 nt   +upstreamnt  +downstreamnt
atgaaaatagctacatacaatgtaaatggtgttaatggccgattgcccgtattgcttcgt
tggttggaagaggcgaagcccgatgtcgtttgcttgcaggagttaaaagctcctcaggaa
aaatttcccgaacaggcaatccgagaagctggttataatgttatatggcatggccagaaa
agctggaatggcgtggccatcctcgctcgacatctagatataatagagtttggacgtgta
cttccgggagatccggaggatacacatagccgatatatcgaagcaagtatcaataacatt
catataggatgtctctatttgccaaacggtaatccggttcccggacctaagtttgactat
aagctcaagtggcttcagcgtttagccaatcacgcacaggagttattgaataagaatatt
cctgtgatattaacgggcgactataatgtgatccccaccgaactcgatgtatacaaaccg
gaacgttgggtagacgatgcattatttcggccggaggtgcgtatggctttctctgattta
atgacgcaaggatggacggatgcaattcgacaattatatcccaacgagcggatttacact
ttttgggattatttccgtaatgcatatggccgcgacgccggcttacgtattgatcacttt
ttgctcagcccacaactggttgaaaaactggttgcagccggagtggatcgttatgtgcgt
gggtgggaaaaaacaagcgatcacgccccggtttggatagaattgcgtgatctaccgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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