KEGG   Shewanella halifaxensis: Shal_2506
Entry
Shal_2506         CDS       T00654                                 
Name
(GenBank) lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
  KO
K11085  ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
Organism
shl  Shewanella halifaxensis
Pathway
shl02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:shl00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Shal_2506
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:shl02000]
    Shal_2506
Enzymes [BR:shl01000]
 7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.6  ABC-type lipid A-core oligosaccharide transporter
     Shal_2506
Transporters [BR:shl02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    Shal_2506
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N DEAD APS_kinase AAA_16 nSTAND3 AAA_29 AAA_22 DUF87 RsgA_GTPase ABC_ATPase AAA_15 AAA_23 NB-ARC
Other DBs
NCBI-ProteinID: ABZ77063
UniProt: B0TK44
Position
complement(3022225..3024048)
AA seq 607 aa
MTTSPKNEVWTVFKRLLGYLKPLKTVLAFAIIGLAMYALVDATFIAVIKPFIDEGFGGQA
GQAAQAAGGISSLDLGTSGGFNSSSDVLLMAPFVVIGLFSLRGLANFLSTYCISYMSARV
IMDMRQEVFEHYLTLPVSYIDKENTGNLISRVTYDTEQIARASGSALITIVRDSITVVGM
IAIMFYFSWKLSLVILVVGPIIGVVITVVSRRFRKVSKQIQTAMGGVTAATEQMIKGHKN
VLSFGGQETEAQRFAKVNDQNRYQTMKLATAQAISQPVVMIIGSFALAFVLYAASIESMK
AELTAGTFATILGAMLAMLQPIKNLTRVNAEFQRGIAACTTVFELLDTEPESDTGTLEVD
RVKGELAFNNVDFSYPGHEKLALNGIDFKVEQGQTLALVGRSGSGKSTIASLITRFYTGL
KAGEITLDGHNINDYKLKSLRSQVALVSQQVTLFNDSIANNIAYAYPGVATKEQIIEAAT
LAHAMEFIEPMPEGLDTQIGENGVMLSGGQRQRIAIARAILRNSPVLILDEATSALDTES
EKAIQQGLDNLRQNRTSIVIAHRLSTIESADQILVVDQGQIVERGTHVSLLAKGGVYANL
YQMQFGS
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgacaacatctcctaaaaatgaagtctggactgtatttaagcgcctgttaggctattta
aagcctcttaaaacagtgttagcttttgccatcattggccttgcaatgtacgcccttgtc
gatgccacttttattgcggtgattaaacctttcatcgatgaaggcttcggcggtcaagct
ggacaggcggctcaagctgctggtggcataagtagtttagacttaggcacgagcggtggt
ttcaactcatcgagtgatgtcctattgatggcaccgtttgtggttatcggactattctcg
cttcgcggtctggcaaacttcctatcgacttactgtatatcctacatgagtgcgcgggtg
atcatggatatgcgccaagaggtgtttgagcattacctgactctacctgtgagctacata
gataaagaaaacactggtaaccttatctctcgtgtcacctatgacacagagcagatcgcg
cgcgcgtcgggcagtgcgcttatcactatcgttcgtgacagtattactgttgtcggcatg
attgcaatcatgttctatttctcttggaaattgtctttggttatcttggttgtaggcccc
attatcggtgtggtgattactgtcgtcagccgccgctttagaaaagtctctaagcagatc
caaaccgcaatgggtggtgtgacggctgcgactgagcagatgatcaaaggccataagaac
gtattgtcttttggcggacaagaaacagaagcccagcgctttgctaaagtgaacgatcaa
aatcgttatcaaacaatgaaactggctacggcgcaagcgattagtcagccagtcgtgatg
attattggctcatttgcattggcatttgttttatatgccgcaagtatcgaaagcatgaaa
gctgagctaacagcgggtacttttgccaccatattaggtgccatgcttgccatgctacag
ccgattaaaaacctcacccgtgttaacgcagaatttcagcgcggtattgccgcctgtacc
acggtatttgagttactcgatacagagccagaaagtgatacgggaacgttggaagttgac
cgtgttaaaggtgagctggcctttaacaacgtggactttagttatccaggccacgagaaa
ctggcacttaatggcatcgactttaaagttgagcaagggcaaaccttggccttagtggga
cgttcaggctctggtaagtcgaccatcgcaagcttaatcactcgcttctacaccggtctt
aaggcgggtgaaattacgcttgatggtcacaatatcaatgattacaaactgaagtcgctg
cgaagccaagttgcgttagtgtcacagcaagtgacgctgtttaatgacagcatcgctaat
aacatcgcttatgcttacccaggcgtggcgactaaagagcagatcatcgaagcggcgaca
ctcgctcatgctatggagtttatcgagcctatgcctgaagggttagatacccaaattggt
gagaatggcgtgatgctctctggtgggcaaagacagcgaattgccattgcacgagcaata
ctacgtaactcgcccgtgcttatacttgatgaagcaacctctgcacttgatactgagtca
gaaaaggcgattcagcaagggcttgataacctacgtcaaaaccgaacctctatcgtgatt
gcccaccgtttgtcgaccattgaaagcgccgatcaaattcttgtggttgatcagggacag
attgtagagcgtggcactcatgtatccttgcttgctaagggtggcgtttacgccaacctg
tatcagatgcagtttggtagctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (25)   

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