KEGG   Shewanella sp. MR-7: Shewmr7_2347
Entry
Shewmr7_2347      CDS       T00389                                 
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
shm  Shewanella sp. MR-7
Brite
KEGG Orthology (KO) [BR:shm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:shm03021]
    Shewmr7_2347
Transcription machinery [BR:shm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Shewmr7_2347
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_ECF HTH_24 DUF6589
Other DBs
NCBI-ProteinID: ABI43334
UniProt: Q0HU71
Position
2786457..2787125
AA seq 222 aa
MENFQSHLAQNRYDRQLSSPIDMAMENDSTISTANEPITDADPLTRAIIRVANQRDKAAF
AELFSHFMPKIRAFGLQRLNQQGLAMDLVQETMTLVWTKAHLYNADKGSVATWVFTIMRN
QCFDMLRRIQHNREDAFGDDIWPIYDVAVSQEGGPDHKLTAKLLAHLDALPLPQRQVVQG
IYMQELTQQELADALKVPIGTIKSRLRLGLEKLKSFLETQHD
NT seq 669 nt   +upstreamnt  +downstreamnt
atggaaaattttcaatcacatttagcgcaaaatcgctatgataggcagttatcatcccct
atcgatatggctatggaaaacgatagcactatttcaactgctaatgagccaatcacagat
gcggatcctttgacgcgagccattataagagtcgcgaatcaacgggataaagccgccttt
gcggaattgttcagccattttatgcccaaaattcgcgcattcggtctgcaacgcttaaat
cagcaagggctggccatggatctggtgcaagaaaccatgaccttagtatggaccaaagcc
catttgtacaatgccgacaaaggctcggtggcgacttgggtatttaccattatgcgcaac
cagtgtttcgacatgcttaggcgcatccaacataaccgtgaagatgccttcggagatgat
atttggcctatttacgatgtggccgtcagtcaagaaggcggcccagatcataaactcacc
gccaagctactcgcgcacttagatgctctacccctgccccaacgccaagtggttcaaggg
atctatatgcaagaactcacgcaacaagaattagccgatgccttaaaagtcccgattggt
acgataaaatcgcgactcagattggggttagaaaagctgaaaagctttttggagacgcaa
catgattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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