KEGG   Shewanella sp. MR-7: Shewmr7_2921
Entry
Shewmr7_2921      CDS       T00389                                 
Name
(GenBank) signal recognition particle subunit FFH/SRP54 (srp54)
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
shm  Shewanella sp. MR-7
Pathway
shm02024  Quorum sensing
shm03060  Protein export
shm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:shm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Shewmr7_2921
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Shewmr7_2921
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Shewmr7_2921
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:shm02044]
    Shewmr7_2921
Enzymes [BR:shm01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Shewmr7_2921
Secretion system [BR:shm02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Shewmr7_2921
  Eukaryotic Sec-SRP protein
   Shewmr7_2921
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 cobW AAA_24 AAA_33 KTI12 AAA_30 YqeC FliD_C AAA_14 AAA_16 Helicase_RecD APS_kinase AAA_31 TsaE KAP_NTPase
Other DBs
NCBI-ProteinID: ABI43905
UniProt: Q0HSK0
Position
complement(3462846..3464219)
AA seq 457 aa
MFENLTDRLSRTLKNISGRGRLTEENVKETLREVRMALLEADVALPVVREFVNNVKERAV
GQEVAKSLSPGQAFIKIVQSELEKSMGEANQALDLATQPPAVVMMAGLQGAGKTTSVAKL
GKLLRTRHKKSVLVVSADVYRPAAIKQLETLATEVDVEFFPSDVSQKPIDIAKAAIAYAK
LKFIDVVILDTAGRLHVDEAMMDEIKALHAAVKPIETLFVVDAMTGQDAANTAKAFNEAL
PLTGVILTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRIASRILGMGDV
LSLIEEVERGVDKDKAMKLASKVKQGGSFDLEDFREQLQQMKNMGGMMSMIEKLPGVGQL
PPDALAQIQDGKMTRQMEAIINSMTAKERKNPDLIKGSRKRRIAAGSGTQIQDVNRLLKQ
FTQMQKMMKKMSAKGGIQKMMRGMRGMMPGGMKFPGR
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgtttgagaatctaaccgacagactgtcacgcacgctgaaaaatatcagtggccgtggt
cgcttaaccgaagaaaacgttaaggaaaccctgcgcgaagtgcgtatggcgctgctggag
gccgatgttgccctgcctgtggtgcgcgaattcgttaacaatgtaaaagagcgtgccgtt
ggtcaggaagtggcgaagagcttaagtcctggtcaagcctttattaagattgttcaaagt
gaacttgaaaaatccatgggcgaggcaaaccaagctctggatttagccactcagccgcca
gccgtggtgatgatggcgggtcttcaaggcgcgggtaaaacgaccagcgttgccaaactg
ggtaaattgctgcgtacgcgccataaaaaatcggtactcgtcgtcagcgccgacgtttat
cgtcctgcggcgattaaacagcttgaaactttagcgaccgaagtcgatgtggagttcttc
ccatcggatgtgagccaaaagccaatcgatatcgccaaggcggccattgcctacgctaaa
ctcaaatttatcgatgtggtaatcctcgacaccgcgggtcgtctgcacgtcgatgaagcc
atgatggatgagatcaaggcgctgcacgcggcggttaagcctattgagacactgttcgta
gtcgatgccatgacgggtcaagacgctgcaaacacggccaaagcctttaacgaagcgctg
ccgctcaccggtgtgattttaactaaggtcgacggtgatgcgcgcggcggtgcggcatta
tcgattcgccacataactggcaagccgattaaattcctcggtgtcggtgaaaagaccgat
gctctagagcctttccatccagaccgtatcgcctcacgtattctcggcatgggcgacgta
ttatcgcttatcgaagaagttgagcgcggtgtagataaagacaaggcgatgaagctggct
tctaaagtgaagcagggcggcagttttgatctcgaagatttccgtgaacagttacagcag
atgaaaaacatgggcggcatgatgagcatgattgaaaagctgcccggtgtgggtcaattg
ccaccggatgccttagcgcaaatccaagacggaaaaatgacccgtcaaatggaagccatc
attaactcaatgacggcgaaagagcgtaaaaaccccgatttaatcaagggctcacgtaag
cgccgtatcgctgcgggttctggtacacaaattcaagacgtgaaccgtttattgaaacag
tttacccaaatgcaaaagatgatgaagaagatgtcggccaagggcggcatccagaaaatg
atgcgcggaatgcgtggcatgatgcctggcgggatgaaatttcctggccgttaa

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