KEGG   Shewanella sp. ANA-3: Shewana3_0390
Entry
Shewana3_0390     CDS       T00428                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
shn  Shewanella sp. ANA-3
Pathway
shn00300  Lysine biosynthesis
shn00470  D-Amino acid metabolism
shn01100  Metabolic pathways
shn01110  Biosynthesis of secondary metabolites
shn01120  Microbial metabolism in diverse environments
shn01230  Biosynthesis of amino acids
Module
shn_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:shn00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Shewana3_0390
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Shewana3_0390
Enzymes [BR:shn01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     Shewana3_0390
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N DUF1955
Other DBs
NCBI-ProteinID: ABK46633
UniProt: A0KS64
Position
450725..451969
AA seq 414 aa
MDHFLYQDNTLYAEGCRVNDLAQQYGTPLYIYSRATLERHWHAFNNAVADHPHLVCYAVK
ANSNLAVLNVLARLGSGFDIVSGGELARVIEAGGDPAKVVFSGVGKTVAEMEQALNLGIY
CFNVESSAELEQLNDVAGRLGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAMDEAEV
VFARAHALPHLQVKGVDCHIGSQLTEIQPFLDAMDRMLALIDRLADQGIVIEHFDVGGGL
GVTYDDETPPHPDVYAAALLARLGDRKLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRF
AIVDGAMNDLIRPALYSAWQNIIPVNPRDEQAQVFDIVGPVCETGDFLGKDRALAIAAGD
LLVVRSSGAYGFAMASNYNTRPRAAEVMVDGDKAYLVREREKLAQLWQGEQLLP
NT seq 1245 nt   +upstreamnt  +downstreamnt
ttggatcactttctctaccaagacaataccctgtacgccgaaggctgtcgggtcaatgat
ttagcccagcagtatggcacgccactgtatatctattcccgtgcgacgctcgaacgtcac
tggcatgcgtttaacaatgcggtggccgaccatccacatttagtgtgttacgcggtgaaa
gccaactcaaacttagccgtactgaacgtcttggctcgtttaggcagtggttttgatatt
gtctcgggcggtgagttagcacgggtgattgaagccggtggcgatcctgccaaagtggtg
ttttcgggcgtgggtaaaaccgttgccgaaatggaacaggcacttaacctcggtatttat
tgctttaacgtcgaatcgagcgccgagcttgaacaacttaatgacgttgcaggccgctta
ggtaaagttgccccagtgtcactgcgggtgaatcccgatgtcgatgccggtacgcatcct
tatatctcgacgggccttaaagagaacaaatttggtatcgccatggatgaggccgaagtc
gtattcgcccgtgcccatgcgctgccacatttacaggtaaaaggggtagattgccatatt
ggttcacagctgaccgagatccagcctttcctcgatgcgatggacagaatgttagccctt
atcgaccgtctggccgatcaaggcattgtgattgaacacttcgatgtgggtggcggttta
ggggtgacctatgatgatgaaaccccgccgcatcccgatgtttacgctgctgcactgctc
gcgcgtttaggtgatcgcaagctcaagttaattttcgagccgggtcgtgccatcgccgct
aacgcggggattttcgtcactcaggtgctgtaccttaaagaaaacagcgataaacgtttt
gcgattgtcgacggcgcgatgaacgacttaattcgtcctgcactctatagcgcttggcaa
aatatcattccggtaaatccaagggatgaacaagcgcaagtatttgatatcgtagggcca
gtgtgcgaaaccggtgactttttaggtaaagacagagcactcgcgattgcggcgggggat
ttactggttgtgcgctcgagcggtgcctacggttttgccatggcttctaactataacact
cgtccgcgtgcggccgaggtgatggtcgatggtgacaaggcttatctggtgcgtgagcga
gaaaaattagcgcagctctggcaaggtgagcaactcctgccgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (26)   

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