KEGG   Shewanella sp. ANA-3: Shewana3_1291
Entry
Shewana3_1291     CDS       T00428                                 
Name
(GenBank) conjugation TrbI family protein
  KO
K20533  type IV secretion system protein TrbI
Organism
shn  Shewanella sp. ANA-3
Pathway
shn02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:shn00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Shewana3_1291
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:shn02044]
    Shewana3_1291
Secretion system [BR:shn02044]
 Type IV secretion system
  Trb secretion system protein
   Shewana3_1291
SSDB
Motif
Pfam: TrbI
Other DBs
NCBI-ProteinID: ABK47525
UniProt: A0KUQ6
Position
1501877..1503157
AA seq 426 aa
MSQDDTPDLAAPPAGKVAPEAVALRAQPRPVTRLNRRTLAILAGGLSVAVLGATIWSLQP
HRRGTGEQTELYNVDRVSKSEGLDALPTDYSKLPPALPHDVPELGPPLPGDLGPAIVKSQ
QPVTAAYAAPGHDPNDALRKEAEAAAASSVFFRSGAQAAAPVAQSQAATAPGFAANAAFD
PMAAGPASTAAQPADPTAVQNRQDQKEAFLKGGSTETRNSGNLTLPASPYQVMAGTVVAG
ALVTGIKSDLPGDVIATVTEPVYDTATGRFLLIPQGSRILGKYNSQVSYGQSRVQVVWNR
IILPDTSSLTLDNLAGADPAGYAGLEDDVDYHWGRIFAGAALTTLLGVGAELAAPENRQD
GDRVIIAGRDSLQDTVNQIGQEVTRRNLNIQPTLTQRPGLPVRIIVNRDLVLRPYQPLFF
NRGTSR
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgagccaggatgacactcccgacctcgccgctccgccggcgggcaaggtggcgcccgag
gctgtggcgctgcgtgcccagccgcgtccggtcacgcgcctgaaccggcgcacgctggcc
atcctcgcgggcggcctgtcggtcgccgtgcttggggccacgatctggtcgctgcaaccg
catcggcgcggtacgggcgagcaaaccgagctttacaacgtcgatcgcgtctcgaagtcc
gaagggctggatgcgctaccgacggactactcgaagctgccgccagccttgccgcacgat
gtacccgagctggggccgccgctgccgggcgacctcggcccggccatcgtgaagtcgcag
cagccggtgacagccgcctacgcggctcccggccacgacccgaacgatgcgctgcgcaag
gaagccgaagctgccgcagcatcgtccgtgttcttccgctcgggtgcgcaggcggccgcg
ccggtcgcgcagtcgcaggccgccaccgcgccgggcttcgccgccaatgcggcgttcgac
ccgatggccgccgggccggcctcgacggcggcccagcctgccgatccgaccgccgtgcag
aaccggcaagaccagaaggaggctttcctgaaaggcggctctacggaaacccgcaattcc
ggcaacctgaccctgccggcttcgccgtatcaggtcatggccggaacggtggttgccgga
gcgctggtgacgggcatcaagtcggacttgcccggcgacgtgatcgccactgtgacagag
ccggtctatgacacggccaccgggcgtttcctgctgatcccgcagggttcgcgcatcctg
ggcaaatacaacagccaggtcagttacgggcagagccgcgttcaagtcgtctggaatcgg
atcattctgccggacacgtcttcgttgacgctcgacaatctggccggcgcagatccggcc
ggctatgccggcctggaagacgatgtggactaccactggggccgcatctttgccggtgcg
gcgctgacgaccctgctgggcgtcggcgccgaactggccgcgccggagaatcgacaagat
ggcgatcgcgtcatcatcgccgggcgtgacagtttgcaggacacggtgaatcaaatcggc
caggaagtgacccggcgcaacctcaacatccagcccaccttgacccaacggcccggcctg
ccggtgcggatcatcgtcaaccgcgacttggtgttgcggccgtaccagccgctgttcttc
aatcgggggacttcacgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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