KEGG   Shewanella sp. ANA-3: Shewana3_1430
Entry
Shewana3_1430     CDS       T00428                                 
Name
(GenBank) pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
shn  Shewanella sp. ANA-3
Brite
KEGG Orthology (KO) [BR:shn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:shn03009]
    Shewana3_1430
   03016 Transfer RNA biogenesis [BR:shn03016]
    Shewana3_1430
Enzymes [BR:shn01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     Shewana3_1430
    5.4.99.29  23S rRNA pseudouridine746 synthase
     Shewana3_1430
Ribosome biogenesis [BR:shn03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Shewana3_1430
Transfer RNA biogenesis [BR:shn03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    Shewana3_1430
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: ABK47664
UniProt: A0KV45
Position
complement(1660536..1661207)
AA seq 223 aa
MQIFDYQPPSVPWLDLRYQDRDLIIINKPSGLLSNPGRAAHTFDCALTRLQRLYPDTILV
HRLDCATSGIMVFARNKKAESQLKTQFQDRQNEKVYIAEVMGGIAKDAGIIDLAIAPDPE
HPPYQKTQTPGTAGAKSALTHYRVLERRENSTLVELTPQTGRTHQLRVHMLALGHPILGD
EFYGDDEVIKARPRLCLHAQSLRFTHPYSGKAMHFYSKHPFSA
NT seq 672 nt   +upstreamnt  +downstreamnt
atgcagatatttgattaccagcccccttcagtcccttggttagatcttcgctatcaagat
agggatttgatcattattaataaaccttctggattgttgtctaatcccggccgagccgca
cataccttcgattgcgccctcacccggctacaacgcttgtatcctgacactattctcgtg
catcgactcgattgtgctacctcaggcattatggtgtttgcccgcaacaaaaaggccgag
tcccagttaaaaacccagttccaagataggcaaaacgagaaagtgtatatcgccgaagtc
atgggggggatagcaaaggatgcagggataatcgatttagctatcgcgcccgatcccgag
cacccgccctatcaaaagacgcaaacgccgggaacggctggcgcgaagagtgctctaacc
cattaccgagtgctagaaagacgcgaaaacagcaccttagtcgagttaacgccacaaacg
ggccgaacccaccaactgagggtgcatatgctcgccctggggcatcccattcttggggat
gaattttatggcgatgatgaggtgataaaggccagaccgagactctgtcttcacgcccaa
agtttacgttttacccatccttactcgggtaaagccatgcatttttacagtaagcatccc
ttctcggcttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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