KEGG   Shewanella sp. ANA-3: Shewana3_1474
Entry
Shewana3_1474     CDS       T00428                                 
Name
(GenBank) FAD dependent oxidoreductase
  KO
K15461  tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
Organism
shn  Shewanella sp. ANA-3
Brite
KEGG Orthology (KO) [BR:shn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:shn03016]
    Shewana3_1474
Enzymes [BR:shn01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.61  tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
     Shewana3_1474
Transfer RNA biogenesis [BR:shn03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    Shewana3_1474
SSDB
Motif
Pfam: DAO Methyltransf_30 NAD_binding_9 DUF695 AhtL-like_1st NAD_binding_8
Other DBs
NCBI-ProteinID: ABK47708
UniProt: A0KV89
Position
complement(1712516..1714438)
AA seq 640 aa
MGQWGLGDGLELLSLLHHWQTQTQSNTRLLVKVFEPNPINDYELKLLWDQSQSLISTPHL
QPIANAILKAKPARIIGCQRLIFDDGRITVDLHFGDLHTSLTNLPHSPAHPIQQWLVLPH
LASQLSGKLAWQMARLSADDAQLIGVNLAETVQQLAHSSGFSTLNVSQDALNGDASDALP
SQIITDEILLHERKLLRQQADTAQAFTPKPATLAAIDHPVAIVGGGLASANLMLSLAERG
QSSTLFCKDNELGQGASGNRQGAIYPLLTPENDELSRFFQQAFLFSRRRIEALSQASMMD
TNAAPHVTVISHDFCGVLQTGHDERSQQRLDKIIQSQDWPAEIAYAVDANEANEIAQIGI
DKAGFFYPLGGWVCPFEYAKAAVDKASQLANVQCHFNTEITEIECDAQAWYLHSQGQRFG
PFRQLVLANGAQLTQFSASERLQISPFRGQVSHVPAQFKLSQLATVLCANGYLTPSHQGL
HCLGASYVKAAEHFDFCPQEQRENLGKMQESYPNQAWVDDIDISGNSARVGVRMVTRDHF
PMMGCAPDVAEILARYELHQLNQQQAEQSKHYWQTTPAPILDGLYILGGLGSRGLSSGPL
AAECLAAQLTGEPLPLDWSTLNKLNPNRMWLRKLLKGKAL
NT seq 1923 nt   +upstreamnt  +downstreamnt
atggggcaatggggattgggcgatggactcgagctgctctctttactgcatcactggcaa
acgcagactcaaagcaacacacggctgttagtgaaagtgtttgagcccaatcccattaac
gattacgaacttaaattactttgggatcaatcgcaaagcttaatttccacgcctcattta
caaccgattgccaatgccatccttaaggcaaaacctgcgcgcattatagggtgccagaga
ttaatctttgatgacggccgcatcacggtcgatttacattttggcgacctgcacacctca
ctcaccaatttgccccacagccctgctcatcctattcagcaatggctggttttaccgcat
ttggcatcgcagttaagcggcaaactagcgtggcaaatggcgcgtttaagtgccgatgat
gcccagctgattggggtcaatttggcagaaaccgtgcagcagcttgcccacagcagtggc
tttagcacccttaatgtcagccaagatgccttgaatggtgatgcaagtgacgcactgcca
agccagattatcaccgatgagattttgctccatgagcgcaaactgctgcgccaacaagcc
gataccgctcaggcatttaccccaaaacctgccacgctcgcggctatagatcaccctgtt
gccatcgtcggtggcggactggcctcagcgaacctaatgctatccctcgccgaacgaggc
cagagtagcacattgttttgtaaggataatgagttaggtcaaggcgcatcaggcaatcgt
caaggagcaatttaccccctactcacgcctgaaaatgatgagcttagccgttttttccaa
caggcctttttgttcagccgccgccgtattgaggcgctgagccaagcgtcgatgatggat
acaaacgccgcccctcatgttacggtgatttcccatgatttttgtggggtactgcaaacg
ggtcatgatgagcgcagccaacaacggctggataaaatcatccaaagtcaggactggccg
gcggaaatcgcctacgccgttgatgcgaatgaagccaacgaaatagcccaaataggtatt
gataaggctggatttttttatccactcggaggctgggtatgcccatttgaatacgccaag
gcggcggtggacaaggcctcgcaacttgccaatgtgcagtgccatttcaataccgagatc
accgaaattgaatgtgatgcacaggcttggtatcttcacagtcaaggccagcgttttgga
ccattccgccaactcgtgctcgccaatggcgcgcagctcacccaattttcggccagtgag
cgattacagataagtccgtttcgcggccaagtgagccacgtccccgcccaatttaaattg
agccaattggcgacagtgttatgtgcgaacggttatctcacgccgagtcatcaaggcttg
cattgcctcggcgccagttatgtcaaagcggcagagcacttcgatttttgcccgcaggag
caacgggaaaacctcgggaaaatgcaagaaagctaccccaaccaagcctgggttgacgat
atcgatatcagtggcaatagcgctcgtgtcggcgtgcggatggtgacgcgggatcatttc
cccatgatgggctgtgcgcccgatgtggctgaaatattggcgcgctatgaactgcatcaa
ctcaatcaacagcaggccgaacaaagcaagcattattggcaaacaacccccgcgcctatc
ctcgatggcctttatattttgggtggtttagggtcgcggggattaagttcaggccccttg
gcggccgaatgcttggcggcacagttaaccggagagccgctgccactggattggtcaacc
ttaaataaactcaaccccaatcggatgtggctacgcaaattactaaaggggaaagcgctt
taa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (27)   

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