KEGG   Shewanella sp. ANA-3: Shewana3_2166
Entry
Shewana3_2166     CDS       T00428                                 
Name
(GenBank) Excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
shn  Shewanella sp. ANA-3
Pathway
shn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:shn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Shewana3_2166
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shn03400]
    Shewana3_2166
DNA repair and recombination proteins [BR:shn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Shewana3_2166
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Shewana3_2166
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C UVR ResIII DEAD AAA_30 AAA_22 Kinesin AAA Ish1
Other DBs
NCBI-ProteinID: ABK48396
UniProt: A0KX77
Position
complement(2594447..2596468)
AA seq 673 aa
MSESVFQLESQFAPAGDQPTAIAKLVDGLESGLACQTLLGVTGSGKTFTIANVIAQLGRP
TIIMAPNKTLAAQLYGEMKEFFPNNAVEYFVSYYDYYQPEAYVPASNTFIEKDASVNAHI
EQMRLSATKALLERKDVVLIASVSAIYGLGDPDSYMKMLLHLRQGDTMGQRDILKRLSEL
QYTRNDLELQRGTFRARGEVIDIFPADSDRYGIRVELFDDEIERLSEFDPLTGQIVKRIA
RTTVYPKTHYVTPREKILEATESIKQELRERKQYLLDNNKLIEAQRIHERVQYDIEMMVE
LGYCSGIENYSRYLSGRAPGEGPPTLLDYLPADGLLIIDESHVTVPQIGAMYKGDRSRKT
TLVEYGFRLPSALDNRPLKFEEFEQLMPQTIYVSATPNPYELDKSGGEIVEQVVRPTGLL
DPELEVRPVSIQVDDLLSEVAKRVAVNERVLVTTLTKRMSEDLTEYLDEHGVKVRYLHSD
IDTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVCILDADKEGFLRSERSLIQTI
GRAARNVNGKVILYADRITQSMAKAMGETERRREKQHAYNLEHGIVPKGVVKRITDVMDV
DDGRDTEKGYSPSSLGKVAEPKAKRYQADAAQLSHDIDKLEKQMHEHARNLEFEQAAALR
DEVKRLRELLITA
NT seq 2022 nt   +upstreamnt  +downstreamnt
gtgtcagaatctgtttttcagcttgaatctcaatttgcccccgcaggggatcagcccacg
gccattgccaagttggtcgatggcttagaatcgggcctagcttgccaaaccctattgggg
gtaacgggctcgggcaagacattcactatcgccaatgtgatcgcccaactggggcgccca
accattattatggcgccaaacaagacgctggcggcgcagctttatggcgagatgaaagag
tttttccccaataatgcggtggaatactttgtctcctattacgattattaccagccagaa
gcctatgtgcccgcatcgaacacctttattgaaaaggatgcgtcggttaacgcccatatc
gagcaaatgcgactctcggccacgaaagcactgttagagcgtaaggatgtcgtcttgatt
gcctctgtatcggcaatttacggtctgggcgatcccgattcctacatgaagatgcttttg
catctacgccagggcgataccatggggcagcgggatattcttaagcgcttgagtgagttg
caatatactcgcaacgatctcgagttgcagcgcggtactttccgcgcccgtggtgaagtt
atcgatattttccccgccgattctgaccgctacgggattcgagtcgaactctttgacgat
gaaattgaacgcttaagcgagtttgacccgttaacggggcaaattgttaaacgtatcgcg
cgcaccactgtttatccgaaaacccactatgtgacgccgcgggaaaaaattctcgaagcg
accgagtcaattaaacaagagctgcgcgagcgtaagcagtatctgctcgacaacaataag
ttgattgaagcccagcggatccatgagcgggtgcaatacgatattgagatgatggtcgag
ctgggctattgctccggtattgaaaactactcccgctatctgtcgggtcgtgcaccgggt
gaaggtccgccaactttgctcgattatttacccgccgatggtttgttgattatcgacgag
tcccacgtcactgtgccgcaaattggcgccatgtataagggtgaccgctcccgtaaaacc
acgcttgtggaatatggcttccgtttaccctcggcgctggataaccggccactgaagttt
gaagagtttgagcaattgatgccgcagaccatttatgtgtcggcaacaccaaacccttac
gaactggataagagtggtggcgagattgttgagcaagttgttcggccaacgggtttgctc
gatcccgagttagaagtgcgtccggtcagcatccaagtggacgatttactctccgaggtc
gccaaacgcgtcgccgttaatgagcgggtgcttgtcaccaccttaaccaagcgcatgtcg
gaggatttaaccgaatacctcgatgagcacggcgtcaaagtccgttatttgcattcggat
atcgataccgtagagcgggtggagatcattcgcgatctgcgcctcggtaagtttgatgtg
ctggtcggtatcaacttgctgcgtgaaggtttagacatgccagaagtttccttagtctgt
attctcgatgcggataaggaaggctttttacgttcggagcgttcgcttattcagaccata
ggccgcgccgcgcgtaacgtcaatggcaaggttatcctctatgccgataggatcacccag
tcgatggccaaggcgatgggtgaaaccgagcgtcgccgcgagaaacaacacgcctacaac
cttgagcatggcatagtgccaaaaggcgtggtcaagcgcattactgacgtgatggatgtg
gacgatggcagagatactgagaagggttatagcccatcgtcactgggtaaagtggctgaa
cctaaagccaaacgttatcaagccgatgcggcgcagcttagccatgatatcgacaagtta
gagaagcaaatgcatgaacatgcgcgtaacttggagtttgaacaggcggcagccctacgt
gatgaggtgaaacgtttacgggagttgctgatcacagcctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (19)   

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