KEGG   Shewanella sp. ANA-3: Shewana3_2246
Entry
Shewana3_2246     CDS       T00428                                 
Name
(GenBank) exodeoxyribonuclease V, beta subunit
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
shn  Shewanella sp. ANA-3
Pathway
shn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:shn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Shewana3_2246
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shn03400]
    Shewana3_2246
Enzymes [BR:shn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Shewana3_2246
DNA repair and recombination proteins [BR:shn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Shewana3_2246
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_11 AAA_25
Other DBs
NCBI-ProteinID: ABK48475
UniProt: A0KXF6
Position
2703964..2707755
AA seq 1263 aa
MTKVSPALPLDSLTLPFGGSRLIEASAGTGKTYTISGLYLRLLLGDGLSEPLNCEQILVV
TFTNAATEELRDRIRRRIQVAFKCFLGLEINDPFVQALYDKTPEAERAIALRRFDLALKS
LDEAAIFTIHGFCQRILADLAFESSLLFESDFTLDDSEFLHHAVRDFWREACYPLPEYLA
QIIASEFGDPDGLVKQLRALLGASEAKPLKPVQPFARLAESLSQSVQRFKLAWPRGRDAL
LELLHSLPLNGQRFGKASDNYPKLAEMFDQLDNFLAFGHGLPPLKVLEALSLSELKLNKG
GVLPSASEAPLLDHMEQLAALINAIKPAFLYSAKQGISERFAKQKQQKNVLTPDDLLTTL
AAAMQANPDTLPKAVASRFPVALIDEFQDTDPLQFAIFSGIYQTRLGLDTQNSAAEPKPR
TDSKLSLLMIGDPKQAIYAFRGADIYTYIEARRQTQAHYFLDTNYRSSRNLVAGVNHLFA
QHSDPFISQSIPFDPVKTPASAAAKQLVEQAPNSAALRLKLLSEGETGLNKASARQTLAE
DTAAEITRLLTQAANGQCRTPKGPLIAKDIAILVRDRNEAAVMKTALSKRQIGAVFLSRD
SVFETVEAREMALILRALASPKDERALRSALATALLGYRAEQIHAFNQDEEQRQRLLEQF
FELHQIWQKRGIMPALLSLANATQMVARLLHSPASTSTDQAEQDAAAQLEASNGERRLTD
FRHLAELLQQKATEIDGISALLNWYEQQLIDNTGTDEQQLRLESEQNLVQIVTIHKSKGL
EYPVCFVPFVSLARDNRRRPTPMLYHRTNADGAQELVWDLEGTDEGWEQAKQETLAEDLR
LLYVALTRPVYLCYLYIANHSRMLKTGLKSQLHETAIGYLLGITDTDCDFSRLQNAAKAL
VAGLESSQPAISIEVVADDIEANKLQTGGANTHTLSARKVSRQYRTPWRVGSYSGLVKNA
PHAKATPGADDEVNAVLGTDTTNSAIDPIWPDHWWQEAADLQAQPLLNRFSFERGANAGS
FMHLVLELIDFTQAQIDLPRELPKAMLQYGIAPEWQPVLEDWYLEVLQAPLALMAQDNQL
INPELCLAALAPQHTLVEMEFYLPLNRLKDTELNQLLGQYGYDTELQFDELQGMLKGFID
LTFEYQGKFYIADYKSNHLGDNIQAYHHSALKQAIGDHRYDLQYILYSLALHRYLAMRLP
NYDYDTHIGGCYYLFLRGMSVQYPGFGIYYDKPPKALILALDALFQRSLETSTVNQQDTG
AMA
NT seq 3792 nt   +upstreamnt  +downstreamnt
atgactaaggtatcacccgctttgccgttagattcgctcaccctgccatttggtggcagt
cgcttaatcgaggccagtgcgggcacggggaaaacctacaccatttcaggtctgtatctc
agattactgcttggggatggcttaagcgaaccgctcaattgtgaacaaattctggtcgtg
acctttaccaatgccgccactgaggaactgagggacaggattcgccgccgcattcaggtt
gcctttaagtgtttcttaggattagagattaacgatccttttgtgcaggcgctgtacgat
aagacccctgaagccgagcgcgctatcgccctgagacgcttcgatttggcgctcaaatcc
ctcgacgaagcggcaatttttacgattcatggattttgtcaacgaattttggccgatctc
gccttcgaatcatcattgttgttcgagtcggatttcaccttagacgacagcgagttttta
caccatgcggtgcgggacttttggcgcgaggcctgctatccgctacctgagtatttagcc
caaatcattgccagcgaatttggcgatcccgacggattagtcaagcagttgagagccttg
ctcggtgccagtgaggccaaaccgcttaaacctgtgcagccctttgctcgtttggcagag
tccttaagccagagtgtgcagcgctttaaactcgcctggccgcgtggccgcgacgcgctg
ttagagttactgcatagcctgccgcttaacggtcaacgttttggtaaggcgagcgacaat
taccctaaactggcggaaatgttcgaccagctggataactttttagcctttggtcatggc
ttaccgccgcttaaagtgctcgaagcgctgtcgttatccgagcttaagctgaataagggc
ggcgtgctcccaagtgcgagcgaggcgccactgcttgaccatatggagcagttagccgca
ttgattaacgcgattaaacccgcatttctttatagcgccaaacaagggatcagcgagcgt
tttgccaagcaaaaacagcaaaaaaatgtgctgacaccagatgatctgctcaccaccttg
gcagcggcgatgcaggccaatcccgacactttgccaaaggcggtggcgagtcgcttcccc
gtggccttaatcgatgagttccaagatacggatcctctgcaatttgctattttctcaggg
atttatcaaacccgtttggggcttgatactcaaaattcggcggctgaacctaagcctcgc
acggatagcaaattaagcctgctgatgattggtgacccaaaacaggcgatttatgctttc
cgcggcgccgatatttacacttatatcgaggcgcgcagacaaacccaggcgcactatttt
ctcgatactaactatcgctcgagccgcaatctggtggccggagtaaatcatttatttgcc
cagcattcagatccttttattagccaatcgattcccttcgatccagtcaaaacgcctgcc
agtgcggcggccaaacaactcgtcgagcaagcgcccaatagtgccgcgctgcggttaaaa
ctcttgagtgaaggcgaaacggggcttaataaagccagtgctagacaaaccttggctgaa
gacaccgccgccgaaatcacccgtttactgacgcaggccgccaatggtcaatgccgcacg
cccaaagggccattaattgctaaagatatcgccatcttagtgcgcgatagaaacgaagcg
gccgtgatgaaaaccgcgctgagcaagcgccagattggcgccgtctttttaagtcgcgac
agcgtatttgaaacagtcgaagcgcgggaaatggcgctcattctgcgcgccttggccagt
cccaaggacgagcgcgccctgcgtagcgcccttgcaaccgccctgcttggttatcgcgcc
gagcaaatccatgcctttaaccaagatgaagagcagcgccaaagactgctggagcagttt
tttgagctgcaccagatctggcaaaaacgcggcattatgccggcgctgctcagcctagcc
aatgcgacccagatggttgcgcgtctgctgcattcccccgcttcgacaagcactgaccaa
gcggagcaagatgcagccgctcagcttgaggcgagcaatggtgaacgtcgactcacggat
tttcgccacttagccgagctgttgcagcaaaaggcgaccgaaattgatgggatcagtgcc
ctgctcaactggtatgagcaacaactgattgataacacaggaactgatgaacagcagctg
cgccttgaaagcgagcaaaacttagtgcaaatcgtcaccatccataagagtaaggggctg
gaatacccagtatgctttgtgccctttgtcagccttgcgcgggacaatcgccgccgcccg
acgcccatgctctaccacagaaccaatgccgatggcgcgcaggagctggtgtgggattta
gaaggcacggacgaaggttgggaacaggcaaagcaggaaaccttagccgaagatctgcgt
ctgctctatgtggcgctcacccgccccgtgtacctgtgttatttgtacatagccaaccat
agccgcatgttaaagacggggcttaaaagccagctgcatgagaccgccatcggttatcta
cttgggatcactgacacggattgtgatttttcgcgtctgcaaaatgccgccaaggcgctg
gtcgcgggtctcgagtcgagtcaacctgcgatcagcattgaggtggtggccgacgacatt
gaggctaataaactgcaaacaggtggagcgaatactcataccttgagtgcccgtaaggtc
agccgtcagtatcgcactccatggcgcgtcggcagttattccggtttagttaaaaatgca
ccacacgctaaagccactcctggcgccgatgatgaggtcaatgccgtattgggcactgat
accacaaatagcgcaattgatcccatatggccagaccactggtggcaagaagctgccgat
ctgcaagcacaacctctgctcaatcgctttagttttgagcgcggcgccaacgcgggtagc
tttatgcacttagtgcttgagttaattgattttacccaagctcaaatcgacttaccccga
gagctacctaaggccatgttgcaatacggcattgcccccgaatggcagcccgtattagag
gattggtatcttgaggtattgcaagcaccactggcattaatggcgcaggataatcagctt
atcaatcccgagctgtgtttagccgcactcgcgccgcagcacaccttagttgagatggag
ttttacctacctctgaatcgcttaaaggatacggagcttaatcaactccttgggcaatat
ggctacgataccgagctgcagtttgacgaattacagggtatgcttaagggctttatcgac
ttaacctttgaatatcaaggcaagttttatattgccgactataagtcgaaccatctgggg
gataatattcaagcctatcatcatagcgccctgaaacaggcgattggcgatcataggtat
gatttgcaatatattctctactcccttgcgctgcaccgctatttagcgatgcgcttgccc
aattatgattacgatacccatatcggcggctgttattatttgtttttacggggaatgtcg
gtgcaatatccaggctttggtatttattacgataaaccgcccaaggcgctgattttggca
ttagatgcgctgtttcagcgcagcctagagacaagcactgtgaatcaacaggatacggga
gcaatggcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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