KEGG   Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_4190
Entry
SHJGH_4190        CDS       T02531                                 
Name
(GenBank) RNA polymerase sigma factor SigL
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
sho  Streptomyces hygroscopicus subsp. jinggangensis TL01
Brite
KEGG Orthology (KO) [BR:sho00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sho03021]
    SHJGH_4190
Transcription machinery [BR:sho03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SHJGH_4190
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_ECF MarR_2 HTH_28 ADSL_C
Other DBs
NCBI-ProteinID: AGF63855
Position
complement(4781021..4781509)
AA seq 162 aa
MRALYREHAGPLLAYVLRLVAGDRQRAEDVVQETLIRAWKNAGQLNRATGSVRPWLVTVA
RRIVIDGHRSRQARPQEVDPSPLEVIPAEDEIDKALWLMTLSDALDDLTPAHREVLVETY
FKGRTVNEAAETLGIPSGTVRSRVFYALRSMKLALEERGVTA
NT seq 489 nt   +upstreamnt  +downstreamnt
atgcgtgcgctgtaccgggagcacgccggacccctgctcgcgtatgtcctgcggctggtc
gccggtgaccggcagcgcgccgaggacgtcgtacaggaaacgctcatccgtgcctggaag
aacgccggtcagctcaatcgggcgaccggttcggtacgcccctggctggtgacggtcgcg
cgccgcatcgtcatcgacggccaccgcagccggcaggcccggccgcaggaggtcgatccg
tcgccgctggaggtcatccccgcggaggacgagatcgacaaggcgctgtggctgatgacg
ctgtcggacgcgctcgacgacctgaccccggcccaccgggaggtgctcgtcgagacgtac
ttcaaggggcgtaccgtcaatgaggcggccgaaacactgggcataccgagcggaacggtc
cgttcccgggtgttctacgccctgcggtcgatgaagctggcactggaggagcggggggtg
acggcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (13)   

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