KEGG   Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_5933
Entry
SHJGH_5933        CDS       T02531                                 
Name
(GenBank) DNA polymerase III subunit beta
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
sho  Streptomyces hygroscopicus subsp. jinggangensis TL01
Pathway
sho03030  DNA replication
sho03430  Mismatch repair
sho03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sho00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SHJGH_5933
   03430 Mismatch repair
    SHJGH_5933
   03440 Homologous recombination
    SHJGH_5933
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sho03032]
    SHJGH_5933
   03400 DNA repair and recombination proteins [BR:sho03400]
    SHJGH_5933
Enzymes [BR:sho01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SHJGH_5933
DNA replication proteins [BR:sho03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SHJGH_5933
DNA repair and recombination proteins [BR:sho03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SHJGH_5933
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_2 DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: AGF65596
Position
complement(6716413..6717543)
AA seq 376 aa
MEFRIERGALAEAVGWAAKSLPARSPVPVLGGLMLDAREGRLRISGFDYEASADIEVAAK
TPAPGRVLVPGRRLLDICRVLPDAMVRCALEGVRFTMDGGGTRFGLSTLPVQEYPALPEL
PARRGVVDAAELAAAVGQVVMAAGRDDTLPVLTGIQMRLDGESMTLAASDRYRYAVRTVS
WQPAETGSEAVEVVVPGRRLTEISRSLAKSGPLRVGLNGSGGGLISFEAAGMRTTLRLLE
GRLPRYDKLFALDGPAVAVAQREPLADAVRRVAVVAEPNSPIRLDFSARGTVLLQAGYED
DVASQRLPATLEGADDMAVAFNPAYLLEALASFNAPRVRFELLGPGQRAMLTGLPDTDHT
AHEEHRHLLMSVRQLG
NT seq 1131 nt   +upstreamnt  +downstreamnt
atggagttccggatcgagcggggcgctctggcggaggcagtgggttgggcggccaagtcg
ctgcccgcccgttcgcccgtgccggtgctgggcgggttgatgctggacgcccgggagggc
cggctgcgcatctcgggcttcgactacgaggcttccgccgacatcgaggtggcggcaaag
accccggcacccggtcgggtgctcgtacccgggcgccggctgctcgacatctgccgggtg
ctgcccgacgcgatggtgcggtgcgcgctggagggtgtgcgcttcacgatggacgggggc
ggtacgcgcttcgggctgtcgacgctgcccgtacaggagtacccggcgctgcccgagctt
ccggcccgtcgcggagtggtggatgcggccgagctcgccgccgccgtcgggcaggtcgtg
atggcggcgggccgtgacgacacgctcccggtgctcacgggcatccagatgcggctggac
ggcgagtcgatgacgctggccgcgtcggaccggtaccgctatgccgtgcgcacggtgtcc
tggcagcccgcggaaaccggctccgaggccgtggaggtggtggtacccggccgcaggctg
accgagatctcccgttcgctggcgaagtccggcccccttcgtgtcgggctgaacggctcg
ggcggcggcttgatctcgttcgaggcagccgggatgcgtacgacgctgcggctgctggag
gggcggctgccgcgctacgacaagctgttcgcgctggacggcccggcagtcgcggtcgcg
cagcgggagccgctcgccgacgcggtccgccgtgtcgcggtcgtcgcggagcccaacagc
cccatccggctggacttctccgcccggggaaccgtcctgctccaggcggggtacgaggac
gacgtcgcttcacagcggctcccggccacgctggagggcgccgacgacatggcggtcgcc
ttcaacccggcgtacctgctggaagccctcgcttccttcaacgccccccgggtgcgcttc
gaactcctgggccccggacaacgggcgatgctgaccggcctaccggacacggaccacacg
gcacacgaggaacaccgccatctgctcatgtcggtacgccagttgggctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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