KEGG   Shewanella putrefaciens 200: Sput200_0889
Entry
Sput200_0889      CDS       T02015                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
shp  Shewanella putrefaciens 200
Pathway
shp03410  Base excision repair
shp03430  Mismatch repair
shp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:shp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Sput200_0889
   03430 Mismatch repair
    Sput200_0889
   03440 Homologous recombination
    Sput200_0889
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shp03400]
    Sput200_0889
DNA repair and recombination proteins [BR:shp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     Sput200_0889
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Sput200_0889
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Sput200_0889
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB
Other DBs
NCBI-ProteinID: ADV53365
UniProt: E6XLR9
Position
988495..990219
AA seq 574 aa
MIHKIVRRPTVDDSHLPVHLPPLLKQLYARRGVMPHECELALQGLLRPETMKGLIEAAAI
IADAMQANKSILIVGDFDADGATSTSVCMLALRMMGALKVDYLIPNRFDYGYGLSPEIVA
VAASKQAELLITVDNGISSIEGVAAAKAFGMQVIITDHHLPGHELPAADAIVNPNQPGCP
FASKSIAGVGVAFYLMTALRAELRTRNWYQSRGIAEPNLGTLLDIVALGTVADVVSLDAN
NRILVEAGLQRVRAGRCRVGITALLEVAKRNPARIVASDFGFAVGPRLNAAGRLDEMALG
VETLLCEDIMYARRMAAELDGLNQERRELEVGMQQEALKSLEHLKLNEAELPWGIALFQE
DWHQGVIGILASRIKDKYHRPVIAFADAGNGEIKGSARSIKGLHMRDLLELVNTRHPGLI
IKFGGHAMAAGLSLKAGSFATFAKAYDDAVREQLKPELLTGELWSDGELTPTELNLEIAQ
LLRNAGPWGQAFEEPLFDGYFKIVQQRLVGERHLKLVLETQCGTVMLDAIAFNVDLHTWP
DATINHARIVYKLDVNEYRGNFSLQLMVEQIEAM
NT seq 1725 nt   +upstreamnt  +downstreamnt
ttgatccataagatagtccgtcgcccaaccgttgatgacagtcatttacccgtccatctt
ccacctctgttaaaacagctttatgctcgccgaggtgtcatgccccatgaatgcgagctt
gcgcttcaagggcttttacgcccagaaacgatgaaaggattgattgaggccgcagccatt
attgctgatgcgatgcaggcgaataagtcgattttaatcgtgggtgactttgatgccgac
ggcgcaacatcaacgagtgtgtgtatgttagcgctacggatgatgggcgctctgaaagtg
gattatttgatccccaatcgtttcgattatggttatggactcagccctgaaattgtcgcg
gttgccgcctcgaaacaggctgaactattaatcacagttgataatggtatttcctcaata
gaaggtgttgcagcggctaaagcctttggtatgcaagtgattattaccgaccatcatttg
cctggccatgaattaccggctgccgatgcgatagtgaaccctaaccaaccgggctgtcca
tttgccagtaaatcaatcgcgggggttggcgtggccttttatttgatgacagcactaagg
gcagaacttcggacgcgaaactggtatcaatcccgcggcatcgctgagcccaatttaggc
acactgctcgatattgtcgccctaggcactgttgccgatgtggtatcactcgatgccaat
aatcgaattttggtcgaggcgggactgcagcgcgtgcgagccggacgttgccgtgtgggg
attaccgcgctgcttgaggtggcgaagcgaaatcctgcgcgcattgtcgcatctgacttt
ggttttgccgtggggccaaggctcaatgccgcaggccggttggatgaaatggcacttggg
gttgaaaccttactgtgtgaagacataatgtatgcgcggcgcatggccgcagagcttgat
gggttaaaccaagagcgccgcgagctggaagttggtatgcagcaggaagccttaaaaagc
ctagagcatttaaagctcaacgaagctgaattaccttggggtatcgccttatttcaagaa
gattggcatcaaggcgttatcgggattttggcctcgcgcattaaagacaaatatcataga
cccgtgattgcctttgccgatgcgggcaatggtgaaattaaaggttcggcgcgttcgata
aaaggcttgcatatgcgcgacttgctcgagttagtgaacactcgccatccaggactaatt
atcaaatttggcggtcatgcaatggcggcgggtttatcgctcaaagcgggcagttttgcg
acatttgctaaagcctatgatgatgcggtgcgtgaacagcttaaacctgagttattaacg
ggcgagctttggtccgatggggaactcactcctacagagttgaatcttgaaattgctcag
ctattgcgtaatgcggggccttggggacaagctttcgaagagccgctctttgatggttat
tttaaaatagtgcagcagcgccttgttggtgagcgccaccttaagcttgtgctcgaaacc
caatgcggcactgtgatgctcgatgccattgcctttaatgtggatttgcacacttggccc
gatgcgacaattaatcatgctcgaattgtctataaactcgatgtgaatgagtatcgcggc
aatttttcgctgcaactgatggttgaacaaatcgaagctatgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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