KEGG   Shewanella putrefaciens 200: Sput200_2724
Entry
Sput200_2724      CDS       T02015                                 
Name
(GenBank) RNA polymerase sigma-28 factor for flagellar operon, FliA
  KO
K02405  RNA polymerase sigma factor FliA
Organism
shp  Shewanella putrefaciens 200
Pathway
shp02020  Two-component system
shp02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:shp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Sput200_2724
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Sput200_2724
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:shp03021]
    Sput200_2724
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:shp02035]
    Sput200_2724
Transcription machinery [BR:shp03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Sput200_2724
Bacterial motility proteins [BR:shp02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    Sput200_2724
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 UPF0122 HTH_23 HTH_10 GerE Ketoacyl-synt_2 Rv2175c_wHTH
Other DBs
NCBI-ProteinID: ADV55128
UniProt: E6XGQ8
Position
complement(3082889..3083602)
AA seq 237 aa
MNKAAAYTCLDNKSSIVEQYAPLVKRIAHHLLARLPASVQLDDLLQAGMMGLLEASSKFD
GGKGAKFETFAGIRIRGAMLDEIRRGDWVPRSVHRNNRRVAQAIDELEQELGRDARDTEI
AEKLDMTLDEYHHILNDVSVGKIIGIEDLGVSQDILTLSDRSDDGSFEALAETQFHSALV
EAIKLLPERDALVLSLYYDEALNLKEIGAILEVSESRVSQILSQAMLRLKAKLKHWT
NT seq 714 nt   +upstreamnt  +downstreamnt
gtgaataaagccgcagcgtatacttgtttagacaataaatcgtctatcgttgaacagtat
gctccgttggttaaaagaattgcacatcatttactcgccagactgccagcttctgtgcag
ctagatgatctactacaagctgggatgatgggactattagaagcatcatccaagtttgat
ggtggaaaaggtgcaaaatttgaaaccttcgctggcatacggatccgtggtgccatgctg
gacgaaattcgtcgaggtgattgggtcccacgttctgttcatcgtaataatcgtagggta
gcacaagccattgatgagttagagcaagaactgggccgtgatgcacgtgacacagaaatt
gcagaaaaacttgatatgacgctcgatgagtaccatcatattcttaacgatgtttctgtc
ggaaaaatcatagggatagaagacttaggtgtatcgcaagatatactaacgctgagcgat
aggtccgacgatggctcgtttgaagctctcgctgagactcagtttcattccgcattagtt
gaggcaataaaattattgccagaaagagatgcgttagtgttatcgctgtactacgatgaa
gcattgaatttaaaagagattggcgccattcttgaagtaagcgaatcgcgagttagccag
atattaagtcaggctatgttgcgactcaaagctaagctcaagcactggacataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (20)   

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