KEGG   Shigella sp. PAMC 28760: A0259_02355
Entry
A0259_02355       CDS       T04390                                 
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
shq  Shigella sp. PAMC 28760
Pathway
shq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:shq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A0259_02355 (groEL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shq03019]
    A0259_02355 (groEL)
   03110 Chaperones and folding catalysts [BR:shq03110]
    A0259_02355 (groEL)
   03029 Mitochondrial biogenesis [BR:shq03029]
    A0259_02355 (groEL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:shq04147]
    A0259_02355 (groEL)
Enzymes [BR:shq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     A0259_02355 (groEL)
Messenger RNA biogenesis [BR:shq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     A0259_02355 (groEL)
Chaperones and folding catalysts [BR:shq03110]
 Heat shock proteins
  HSP60 / Chaperonin
   A0259_02355 (groEL)
Mitochondrial biogenesis [BR:shq03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    A0259_02355 (groEL)
Exosome [BR:shq04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   A0259_02355 (groEL)
  Exosomal proteins of other body fluids (saliva and urine)
   A0259_02355 (groEL)
  Exosomal proteins of breast cancer cells
   A0259_02355 (groEL)
  Exosomal proteins of colorectal cancer cells
   A0259_02355 (groEL)
  Exosomal proteins of bladder cancer cells
   A0259_02355 (groEL)
SSDB
Motif
Pfam: Cpn60_TCP1 V18-19
Other DBs
NCBI-ProteinID: AMR21553
Position
498509..500155
AA seq 548 aa
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI
DKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RVASKLADLRGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNA
ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKNDAADLGAAGGMGG
MGGMGGMM
NT seq 1647 nt   +upstreamnt  +downstreamnt
atggcagctaaagacgtaaaattcggtaacgacgctcgtgtgaaaatgctgcgcggcgta
aacgtactggcagatgcagtgaaagttaccctcggtccgaaaggccgtaacgtagttctg
gataaatctttcggtgcaccgaccatcaccaaagatggtgtttccgttgctcgtgaaatc
gaactggaagacaagttcgaaaatatgggtgcgcagatggtgaaagaagttgcctccaaa
gcgaacgacgctgcaggcgacggtaccaccactgcaaccgtactggctcaggctatcatc
actgaaggtctgaaagctgttgctgcgggcatgaacccgatggacctgaaacgtggtatc
gacaaagcggttaccgctgcagttgaagaactgaaagcgctgtccgtaccgtgctctgat
tctaaagcgattgctcaggttggtaccatctccgctaactccgacgaaaccgtaggtaaa
ctgatcgcagaagcgatggacaaagtcggtaaagaaggcgttatcaccgttgaagacggt
accggtctgcaggacgaactggacgtggttgaaggtatgcagttcgaccgtggctacctg
tctccttacttcatcaacaagccggaaactggcgcagtagaactggaaagcccgttcatc
ctgctggctgacaagaaaatctccaacatccgcgaaatgctgccggttctggaagctgtt
gcaaaagcaggtaaaccgctgctgatcatcgctgaagatgtagaaggcgaagcgctggca
actctggttgttaacaccatgcgtggcatcgtgaaagtcgctgcggttaaagcaccgggc
ttcggcgatcgtcgtaaagctatgctgcaggatatcgcaaccctgactggcggtaccgtg
atctctgaagagatcggtatggagctggaaaaagcaaccctggaagacctgggtcaggct
aaacgtgttgtgatcaacaaagacaccaccactatcatcgatggcgtgggtgaagaagct
gcaatccagggccgtgttgctcagatccgtcagcagattgaagaagcaacttctgactac
gaccgtgaaaaactgcaggaacgcgtagcgaaactggcaggcggcgttgcagttatcaaa
gtaggtgctgctaccgaagttgaaatgaaagagaaaaaagcacgcgttgaagatgccctg
cacgcgacccgtgcagcggtagaagagggcgtggttgctggtggtggtgttgcgctgatc
cgcgtagcgtctaaactggctgacctgcgtggtcagaacgaagaccagaacgtgggtatc
aaagttgcactgcgtgcaatggaagctccgctgcgtcagatcgtattgaactgcggcgaa
gaaccgtctgttgttgctaacaccgttaaaggcggcgacggcaactacggttacaacgca
gcaaccgaagaatacggcaacatgatcgacatgggtatcctggatccaaccaaagtaact
cgttctgctctgcagtacgcagcttctgtggctggcctgatgatcaccaccgagtgcatg
gttaccgacctgccgaaaaacgatgcagctgacttaggcgctgctggcggtatgggcggc
atgggtggcatgggcggcatgatgtaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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