KEGG   Shigella sp. PAMC 28760: A0259_02450
Entry
A0259_02450       CDS       T04390                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
shq  Shigella sp. PAMC 28760
Brite
KEGG Orthology (KO) [BR:shq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shq03019]
    A0259_02450
   03009 Ribosome biogenesis [BR:shq03009]
    A0259_02450
Messenger RNA biogenesis [BR:shq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     A0259_02450
Ribosome biogenesis [BR:shq03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    A0259_02450
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: AMR21572
Position
518522..519067
AA seq 181 aa
MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD
WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM
PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK
L
NT seq 546 nt   +upstreamnt  +downstreamnt
atgagtgccaatgaaaacaacctgatttggatcgatcttgagatgaccggtctggatccc
gagcgcgatcgcattattgagattgccacgctggtgaccgatgccaacctgaatattctg
gcagaagggccgaccattgcagtacaccagtccgatgaacagctggcgctgatggatgac
tggaacgtgcgcacccataccgccagcgggctggtagagcgcgtgaaagcgagcacgatg
ggcgatcgggaagctgaactggcaacgctcgaatttttaaaacagtgggtgcctgcggga
aaatcgccgatttgcggtaacagcatcggtcaggaccgtcgtttcctgtttaaatacatg
ccggagctggaagcctacttccactaccgttatctcgatgtcagcaccctgaaagagctg
gcgcgccgctggaagccggaaattctggatggttttaccaagcaggggacgcatcaggcg
atggatgatatccgtgaatcggtggcggagctggcttactaccgcgagcattttatcaag
ctgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (8)   

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