KEGG   Sarcophilus harrisii (Tasmanian devil): 100915562
Entry
100915562         CDS       T02286                                 
Symbol
SMC6
Name
(RefSeq) structural maintenance of chromosomes protein 6 isoform X1
  KO
K22804  structural maintenance of chromosomes protein 6
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:shr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shr03400]
    100915562 (SMC6)
DNA repair and recombination proteins [BR:shr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    SMC5-SMC6 complex
     100915562 (SMC6)
SSDB
Motif
Pfam: SMC_N AAA_23 EzrA Crescentin AAA_21 AAA_29 FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 100915562
NCBI-ProteinID: XP_031805466
Ensembl: ENSSHAG00000004113
Position
2:4339642..4375282
AA seq 1098 aa
MAKRKEENFLPMGMQKKQRQEQDNVSEEESEEEEESLMPLSPGTASTQVISAEVGIIESI
QLKNFMCHAMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKALATNRGSSLKGFVK
DGQSSADISITLRNRGEDAFKPRVYGDSITVQQHISLEGNRSYKLKGQTGNLVSTKKEEL
TAILDHFNIQVDNPVSILTQEMSKQFLQSKNEGDKYKFFMKATQLEQMKEDYSYIMDTKA
RTRDQIEQGEERLLELRRQCLEKEERFQSIADLSVMKKKLEDLKHEMAWALVGEYEKEIQ
EMRNQVSAGEDRTVRLMQKVEDWRARVGVADRKFKAIQDNLEKISEEAIELEPKCIQAKE
DLIHKKKAYNDAEVLYIRCRNEFRGLEKDGEQLRNRIEELKRSANQSLEPARQERQKKIA
SLNEKLKSYEDQEDFLGQEMERFRQTIEKDKEERSRIKQEESDVVQTLNTKRRHLHQLKE
TRTNRLKQFGSQVPALLEAIEDAYRKGQFTRKPVGPLGACIRLRDPELALAIECCLKGLI
FAFCCHNYKDERVLQGLMKKLYPPNASRPQIIVSEFRNEVYDVSRRAAYHPEFPTVLTAL
EIDNAVVANSLIDMRRIETVLLIKSSPLARAVMQLQKPPKNCNEAFTAEGDQVFERRYYS
SERTRPRYLTGDVEKEISHLEKEVENKVAQLNVFQQHVSSLESDLRKNQELVSNHHRHLK
ELKIKIKKILLEIKDLENEEENQSVDISTLEEEDEEIKKQMKKVEEEMKVRKEELDSLRK
QRSEAEQTYEEFKLKIHQVSELAEPVKEELNQAYAEVDTQKRSLRHYEEKLRQHTDTLTA
KKDELSQTEKEHQEKSALARKICPERIEVKKSPSVLDREITRLRQKIQSESNSHGDREEI
IRQYKEAKETYQDLDGKVKSLKRFIKLLDEIMTQRYKTYQQFRRCLTLRCKLYFDNLLSQ
RAYSGKMLFDHKNETLAITVQPGEGSQAAFSDMRSLSGGERSFSTVCFILSLWSIAESPF
RCLDEFDVYMDMVNRRIAMDMILKMADSQHYRQFILLTPQNMSSLPPSRLIRILRMPDPE
RGQRALTFQQANKEQEED
NT seq 3297 nt   +upstreamnt  +downstreamnt
atggcgaaaagaaaggaggagaattttcttcccatggggatgcagaagaagcaaaggcag
gagcaggacaatgtgtctgaggaggagagcgaggaggaagaggagtccctcatgcctctg
tcccccgggaccgcctcgacccaggtgatatcggccgaagtcgggatcatcgagagcatc
cagctgaagaacttcatgtgccacgccatgctggggccttttaagtttggatccaacgtc
aactttgtggtgggaaacaatgggagtggcaagagcgccgtcctgaccgcgctcatagtg
ggcctcggagggaaagctttggccaccaacagaggctcctctctgaaagggttcgtgaag
gatgggcagagctctgccgacatctcgatcacgctccggaacagaggggaggatgccttc
aagccgagagtgtatggggactccatcacggtgcagcagcacatcagcctggagggcaac
cgcagctacaagctcaagggccagaccggaaatctggtttctaccaagaaggaagagctc
acggccatcctcgaccattttaacatccaggtggacaaccccgtgtccattttgacccaa
gagatgagcaagcagttcttgcagtccaagaacgaaggggacaaatacaagttcttcatg
aaagcgacccagctggagcagatgaaagaggattactcatacatcatggacaccaaggcc
agaacccgggaccagattgagcagggggaagagcggcttctggagctccggcgccagtgc
ctggagaaggaggaacgcttccagagcatcgccgacctgagcgtgatgaagaagaagctg
gaggacctgaagcacgagatggcctgggccctggtgggcgagtacgagaaggagattcaa
gaaatgaggaatcaggtgagcgccggggaggatcgcacggtgcggctgatgcagaaggtg
gaggactggcgggccagagtcggcgtggccgataggaagtttaaggctattcaggataac
ttggagaagatcagcgaggaggccattgaactggagcccaagtgcattcaagccaaggag
gatctgatccacaagaagaaggcttacaatgacgctgaggttttatatattcgctgccgt
aatgagtttagagggttggagaaggatggcgagcagctgaggaaccgaattgaggagctg
aagaggagtgctaaccagagtttggagccagcacggcaagaaaggcagaaaaaaattgct
tcgttgaatgaaaagctcaagagctacgaggaccaagaagattttctggggcaggagatg
gagcgcttccggcagactatagagaaagacaaggaggaacggtcccgaatcaagcaagag
gagtcggatgtggtgcagaccctgaacaccaagcgcaggcacctgcaccagctgaaggag
accaggaccaaccgactcaagcagtttggctctcaagtgccagccctcctggaggccatc
gaggacgcttaccgcaagggccagttcacccgcaagcccgtgggcccactgggagcctgt
attcgcctgcgcgaccccgagctcgccttggccatcgagtgctgcctcaagggcctcatt
tttgccttttgctgccacaactacaaggatgagcgggtcctccagggactgatgaagaag
ctttatcctccgaacgcctcccggccccagatcatcgtctcggagtttcgcaacgaagtg
tacgatgtcagccgcagagcggcctatcacccggagtttcccacagtgctcacggctttg
gagatcgacaacgcggttgtagccaatagtctgattgacatgaggaggatagagaccgtg
ctgctgatcaaaagcagcccgctggcccgcgcggtgatgcagttgcagaaaccccccaag
aactgtaatgaggctttcaccgccgaaggcgaccaggtctttgagcgacgctactactcg
tcggagcgcacgaggcctcgctatctcacgggggacgtcgagaaagagatcagccatttg
gagaaagaagtggagaacaaagtggcgcagctgaacgtcttccagcaacacgtgagctcc
ctggagagtgacctgcggaagaatcaagagctggtcagcaaccaccaccggcacctgaag
gagctcaagattaaaataaaaaagatccttctagaaatcaaagatctcgagaatgaagaa
gaaaaccagtctgtggacatctcgactctggaggaggaagacgaagaaattaaaaagcag
atgaagaaagtggaggaagagatgaaggttcggaaggaggagctggacagcttgaggaag
cagcgttcggaggccgagcaaacgtacgaagagttcaagctgaagatccaccaggtctca
gagttggcggagcctgtgaaggaggagctgaatcaggcttacgccgaggtggacacccag
aagcgctccctgcgccactacgaggagaagctccggcagcacacagacacgctcacggcg
aagaaggacgagctgtcccagacggagaaggagcaccaggagaagagcgctctggccagg
aagatctgcccggaacggatcgaggtgaagaagagcccctctgtgctggaccgggagatc
acccggctccggcagaagatccagtcggagagcaacagtcacggtgaccgggaggagatc
atcaggcagtacaaagaggccaaggagacctaccaggatctcgacggcaaagtcaagagc
ctcaagaggtttatcaagttactggatgagatcatgactcagaggtacaagacctaccag
cagttccgcaggtgtctcaccctgcggtgcaagttgtacttcgacaacctgctctcccag
cgggcctactccggcaagatgctctttgaccataagaacgagaccctggccatcacagtc
cagccgggagaggggagccaggccgccttcagtgacatgcgctccctttccgggggggag
cgctccttctccactgtctgcttcattctgtccctgtggtccatcgcggagtcgcccttc
cggtgcctggacgagtttgacgtctacatggacatggtcaacagaagaatagccatggac
atgatcctcaagatggctgattcccagcactaccgccagttcatcctgctcactccccag
aatatgagctctctccccccaagtagactgatcaggatactccgaatgccggacccggag
aggggccagcgggccctgacattccagcaggccaacaaagagcaggaggaggactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (66)   
   KEGG ORTHOLOGY (1)   
   RefGene (61)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (7)   
   Pfam (7)   
All databases (82)   

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