KEGG   Sarcophilus harrisii (Tasmanian devil): 100916223
Entry
100916223         CDS       T02286                                 
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
  KO
K12035  tripartite motif-containing protein 71 [EC:2.3.2.27]
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:shr00001]
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    100916223 (TRIM71)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shr03019]
    100916223 (TRIM71)
   04121 Ubiquitin system [BR:shr04121]
    100916223 (TRIM71)
Enzymes [BR:shr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100916223 (TRIM71)
Messenger RNA biogenesis [BR:shr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100916223 (TRIM71)
Ubiquitin system [BR:shr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    100916223 (TRIM71)
SSDB
Motif
Pfam: NHL Filamin DUF5128 zf-B_box SGL zf-RING_5 DUF4094
Other DBs
NCBI-GeneID: 100916223
NCBI-ProteinID: XP_031796303
Ensembl: ENSSHAG00000017387
Position
5:complement(268314013..268394396)
AA seq 988 aa
MASLSEPDLQLCPQCKKCGSRARISSASATSPPSSQTSESAGGGGGAGGGGGPASASSSS
SSSSSSSCSSSSSRRLHVLPCLHALCRQCLEAQRHPAAAGGPPGEPLHLRCPICDQKVVL
RDSPGMDALPSSNFLLSNLLDVVVAAEETPPPKNNGRGVVVVGGGGGGGGGGGGGNGGGG
SGGGGNTRHHHHHHHHHHPRAPPPPQPQPQPPPTAGSPLQPPQPPPSSSSSSSSSSSSSS
SQQQPPPSSSSSQQPPPPAQHQHREHPHRDHPHASRAPSAPSSAPSSSSSSLMLRRPHSQ
SEARCSSCDEGNPASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIERFGSPAAAAAAAAAA
VANNTAAAAAAAQLALSQTFPGSPFSILSVFPERVSYCQQHDDEVLHFYCDTCSVPICRE
CTMGRHVGHSFIYLQDALQDSRTLTIQLLADAQQGRQAIQLSIEQAQAVAEQVEMKAKVV
QSEVKAVTTRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLDSTISAVQQ
VLEEGRAMDVLLARDRMLAQVQELKNVRSLLKPQEDDRVMFTPPDQALYLAIKSLGFVSS
GAFAPLTKATGEGLKRALQGKVASFTVIGYDHDGEPRLSGGDLLSAVVMGPDGNLFGADI
SDQQNGTYLVSYRPQLEGEHLVSVMMCNQHIKNSPFKVLVKSGRSYVGIGLPGLAFGSEG
DSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGTFYHKFGTLGSRPGQFDRPAGVA
CDSSRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTR
NHRVQLFGPDGTFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNHRLLVIHPDCQS
ARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGSFICKFGAQGSGFGQ
MDRPSGIAVTPDGMIVVVDFGNNRILIF
NT seq 2967 nt   +upstreamnt  +downstreamnt
atggcttcgctttccgagccagatttgcagctctgcccccagtgcaagaagtgcggctcg
cgggctcgcatctcctccgcctcggccacgtcgccgccgtcctcgcagacctccgagtcg
gccgggggcgggggcggggctgggggcgggggcggcccggcctctgcgtcctcctcctcc
tcctcctcctcctcctcctcctgctcctcctcgtcctcacggaggctgcacgtcctgccc
tgtctccacgccttgtgccgccagtgtctggaggcgcagagacacccggcggcggcgggc
gggccgcccggggagcccctccacttgcgctgccccatctgcgaccagaaagtggtgctc
cgcgactcgccgggcatggacgcgctgccctcctccaacttcctcctgagcaacctgctg
gacgtggtggtggcggccgaggagacgccgccgcccaagaacaacggccgcggggtggtg
gtggtgggcggcggcggaggaggcggcggcggcggaggcggcggcaacggaggcggcggt
agcggcggcggcggcaacacccgccatcaccaccatcaccatcaccaccaccacccccgt
gcgcccccgccgccgcagccgcagccgcagccgccgcccacggccggctctccgctgcag
ccgccgcagccgccgccctcctcctcctcctcttcttcctcctcctcctcttcttcctcc
tcgcagcagcagccgccgccttcttcctcctcctcccaacagccgccgccgccggcccag
caccagcaccgggagcacccgcaccgcgaccacccgcacgcgtcccgcgccccgtccgcc
ccgtcctccgccccgtcctcttcctcgtcctcgctgatgctccggcggccgcacagccag
agcgaggcgcgctgcagctcgtgcgacgagggcaacccggccagctcgcgctgcctcgac
tgccaggagcacctgtgcgacaactgcgtccgcgcgcaccagcgggtgcgcctcaccaag
gaccactacatcgagcgcttcggcagcccggccgccgccgccgccgctgccgccgccgcc
gtggccaacaacacggcggccgcggcggcggcggcgcagctcgcgctcagccagaccttc
cccggctcgcccttctccatcctctccgtgttccccgagcgggtcagttactgccagcag
cacgacgacgaggtgcttcatttctactgtgacacctgctccgtgcccatctgccgagag
tgcaccatggggcgccacgtcggccatagcttcatctacctccaggacgcgctgcaggac
tcccgaaccctcaccattcagctgctggccgacgctcagcaaggtcgccaggccattcag
ctgagcattgagcaggcccaggctgtggcggagcaggtggaaatgaaggcgaaggtggtc
cagtcggaagtcaaggcggtcaccacgaggcacaagaaggccctggaggagcgggagtgt
gagctgctgtggaaggtggagaagatccgccaggtcaaggccaagtctctgtacctgcag
gtggaaaagcttcgtcagaacctcaacaagctggacagcaccatcagcgctgtgcagcag
gtcctggaagaggggcgcgccatggacgtgctgctggcccgagaccgcatgctggcacag
gtccaggagctcaagaacgtccggagcctcctcaagccgcaggaagacgacagggtgatg
ttcacccccccggaccaggccctctatctggccatcaagtccttaggcttcgtcagcagc
ggggcttttgcccccctgaccaaggccaccggggaaggcctcaaacgcgccctccaaggc
aaggtggcgtcgttcacggtgatcgggtacgatcacgacggggagccgcgcctctcgggt
ggcgacctgttgtccgcggtggtcatggggcccgacgggaacctgttcggtgccgacatc
agcgatcagcagaacggcacctacctggtcagctaccggccgcagctggagggcgagcac
ctcgtttccgttatgatgtgcaaccagcacatcaagaacagccccttcaaggtgctggtc
aagtccgggcgcagttacgtgggcatcgggctgcccgggctggccttcggcagcgagggc
gacagcgacgggaagctctgccgcccgtggggcgtcagcgtggacaaggaaggctacatc
atcgtggccgaccgcagcaacaaccgcatccaggtgttcaaaccctgcggcaccttctat
cacaagttcggcacactgggctccaggcccggccagtttgaccgcccggcgggagtggct
tgcgactcctcgcgcaggatcgtggtggcggacaaggacaatcatcgcatccagatattc
accttcgaagggcagttcctcctgaaattcggggagaagggcacgaagaacggacagttc
aactatccttgggacgtggcggtgaattcggaaggcaagattctggtctctgatacacgg
aaccaccgggtccagctgttcgggcccgatgggaccttcctgaacaagtatggctttgaa
ggggccctctggaagcactttgactccccccggggtgtgaccttcaaccacgaaggccat
ctggtggtgacggacttcaacaaccaccgcctgctggtcatccatccagactgccagtct
gcacgcttcctggggtcagagggcaccggcaatgggcagttcctgcgcccccagggggtc
gccgtggatcaagaaggacgaatcatcgtggcggattccaggaatcatcgggtgcagatc
ttcgaatccaacggcagtttcatatgcaaatttggtgctcagggaagtggctttggccaa
atggaccgcccctcgggcattgccgtcactccagatggcatgatcgtcgtggttgatttc
ggaaacaatcggatcctcatcttttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (29)   

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