KEGG   Sarcophilus harrisii (Tasmanian devil): 100920059
Entry
100920059         CDS       T02286                                 
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X2
  KO
K19867  PDZ and LIM domain protein 5/6/7
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:shr00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100920059 (PDLIM5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:shr04990]
    100920059 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:shr04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   100920059 (PDLIM5)
SSDB
Motif
Pfam: LIM PDZ DUF4749 PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 100920059
NCBI-ProteinID: XP_003772914
Ensembl: ENSSHAG00000013682
UniProt: G3WKW2
Position
6:139265762..139464310
AA seq 594 aa
MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQG
MTHLEAQNKIKACTGSLNMTLQRASTTPKPEPVSVQKGEPKEVVKPVPIASSAVSKVTST
SNLAYNKAPRPFGVVSSPKVTSIPSPSSAFTPAHATSSSHASPPPVAAVTPPPFATSGLH
ANAKSSADQPFPALSSVKTAVNVPWQPAATSPYANDTAQELTDGQRRGPQADNKQQNGPP
RKHIVERNTEFYHIPTHSDASKKRLIEDTEDWHPRTGTTQSRSFRILAQITGTEHLNESE
NDNIKKTNNIQDPSQPTASTVASSRNVSQGPESHVASRPGVASLTTAAAFKPSGSTNVIK
SPNWQRQNPPAPSTGRISNITPSGATAPTSSVQPQLNEQDTFVQRAEHIPAGKRTPMCAQ
CNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAPECVRC
QRKILGEVINALKQTWHVSCFVCVACNKPIRNNVFHLEDGDPYCETDYYALFGTICHGCE
FPIEAGDLFLEALGHTWHDTCFVCSVCSDSLEGQTFFSKKDKPLCKKHAHSMNF
NT seq 1785 nt   +upstreamnt  +downstreamnt
atgagcaactacagcgtatccttggttggcccagctccttggggctttcgacttcaaggt
ggcaaggacttcaacatgcctttgaccatctctagtctaaaggatggtggtaaagcatct
caagctcatgtgagaataggagatgtggttcttagcatcgatgggataagtgctcaggga
atgacacatcttgaagcacagaacaagattaaggcttgtacaggctctttgaacatgact
ctacaaagagcatctactacaccaaagcctgaaccagtttcagttcagaagggagaaccc
aaagaagtagttaagcctgtacccattgcatcctctgctgtgtccaaagtcacttccaca
tccaacctggcctacaataaggcaccacggccttttggagttgtatcttctccaaaagtc
acatccatcccgtcaccatcatctgccttcaccccagcccatgcgacctcttcatcacat
gcttcccctccaccagtggctgctgtcacacctcccccatttgctacatctggactgcat
gctaatgccaaatctagcgccgaccagccttttcctgccttgagctctgttaaaactgca
gttaatgtcccatggcagcccgcagccacgagcccttatgccaacgacactgcccaggag
ctaactgacgggcagagaagaggaccacaggctgacaataaacagcaaaatggaccacca
aggaagcatatcgtggaacgtaatacagagttttaccacatacctactcacagtgatgca
agtaaaaaacgattgattgaggatactgaagattggcatccaaggacaggaaccacacag
tctcgttctttccgaatcctggctcagatcactggcactgaacacctgaacgaatcagag
aatgataatataaagaagacaaacaatattcaggatccctcccagcctacagcttctact
gtggcctcatccagaaacgtgtcacagggcccagaaagtcatgttgcttctagacctgga
gtggccagcctcaccactgcagcagctttcaaaccttcaggatccacaaatgtcatcaag
tcacctaattggcaacgtcagaacccaccagctccatcaactggaagaatctcaaacatt
acaccatctggagcaactgcaccaaccagttcagtccagcctcaactaaatgaacaagac
acttttgtgcagagagctgaacacattccagcagggaaacgtactccaatgtgtgcccag
tgtaaccaagtcatcagaggacctttcctagtggcattgggaaaatcctggcatccagaa
gaatttaactgtgcccactgcaaaaacaccatggcttacattggatttgtggaagagaag
ggagccctgtattgtgagctgtgctatgagaaattttttgcccctgaatgtgttcgctgc
caaaggaaaatcctgggagaagtcatcaatgctttgaaacagacttggcacgtttcctgt
tttgtgtgtgtggcctgcaataaacccattcgaaacaatgttttccacttggaagatggt
gatccctactgtgaaacagattattatgctctattcggtaccatatgccatggatgtgaa
tttcccatagaagctggtgacctgtttcttgaagctctgggtcacacctggcatgataca
tgttttgtatgttcggtatgttctgacagtttggaaggtcagacttttttctccaagaag
gataaaccactgtgcaagaaacatgctcattctatgaatttctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (8)   
   UniProt (1)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (5)   
   Pfam (5)   
All databases (41)   

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