KEGG   Sarcophilus harrisii (Tasmanian devil): 100920821
Entry
100920821         CDS       T02286                                 
Symbol
TRIM13
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM13 isoform X2
  KO
K12003  tripartite motif-containing protein 13 [EC:2.3.2.27]
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:shr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:shr04121]
    100920821 (TRIM13)
Enzymes [BR:shr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100920821 (TRIM13)
Ubiquitin system [BR:shr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    100920821 (TRIM13)
SSDB
Motif
Pfam: zf-RING_UBOX zf-B_box zf-C3HC4 zf-RING_2 zf-RING_5 zf-C3HC4_4 zf-C3HC4_3 zf-C3HC4_2 zf-RING_4 zf-Nse ATP-synt_E_2
Other DBs
NCBI-GeneID: 100920821
NCBI-ProteinID: XP_003767105
Ensembl: ENSSHAG00000001829
UniProt: A0A7N4PDL6
Position
3:522264861..522322567
AA seq 409 aa
MMELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGNVRNMLWRQSPFKCPTCRK
ETSATGVNSLQVNYSLKGIVEKYNKIKVSPKMPVCKGHVGQPLNIFCLTDMQLICGICAT
RGSHTKHVFCSIEDAYAQERSAFESLFQGFETWRRGDALSRLDTLESSKRKSLQLLTKDS
DKVKEFFEKLQHTLEQKKNEILSDFETMKLAVMQTYDPEINKLNTILQEQRMAFNIAEAF
KDVSEPVVFLQQMQEFREKIKVIKETPLPSSNLPVNPIFKNFDTSQWERIKLVDVDKMSL
PQENIPFTSKIPWSFYQIFVVLCLVGLLVYFTPTMSLDGTLFDDFSVWKAHLSSFSSCYL
TESAEIADQAILYWEQVVDGVFVFSERFKNYTLVLLNGMAEFVCKYKLL
NT seq 1230 nt   +upstreamnt  +downstreamnt
atgatggagctgctggaggaagacctcacatgccctatttgttgcagcttgtttgatgat
ccccgggttttgccctgctctcacaatttctgcaaaaaatgcctggaaggtatcttggag
ggcaatgttcgtaatatgctgtggagacaatcccctttcaagtgccccacttgccggaag
gaaacttcagctactggagtcaatagcctgcaggtcaattactccctgaagggaatcgtg
gaaaaatacaacaagatcaaagtctctcccaaaatgcctgtttgtaagggtcatgtagga
cagcccctcaacatcttctgcttgacagacatgcaactaatctgtgggatttgtgccact
cgtggcagccataccaagcatgtcttctgctctattgaagatgcctatgctcaggaaagg
agtgcctttgagtcattgttccaaggttttgagacctggcgtaggggagatgctctttct
cgcctggacaccttagagtcaagcaagaggaaatctcttcaacttttgactaaggattca
gataaggtgaaggagttctttgagaaactgcagcacactttagagcagaagaagaatgag
atcctgtctgactttgagaccatgaagttagcagtcatgcagacctatgacccagagatc
aataagctcaatacaatcttgcaagagcaacggatggcttttaacattgcagaagccttc
aaggatgtatcagaacccgttgtattcctacagcagatgcaggaatttagggaaaaaatc
aaagtcatcaaagagacccctttaccttcctctaatttgcctgttaaccctatatttaag
aactttgatactagtcaatgggagagaataaaactagtagatgtggacaaaatgtcattg
cctcaagaaaatatcccattcaccagcaagattccttggagcttttatcagatatttgtg
gtgctctgtcttgttggccttcttgtttacttcactcctacaatgtccctggatgggacc
ttatttgatgatttctcagtttggaaagcccatctttccagcttcagttcctgttatcta
acagaatcagcagaaattgcagatcaagcaattttgtattgggaacaggtggtggatggg
gtttttgttttcagtgaaaggttcaagaattacactttggtgttgctgaatggtatggca
gaatttgtttgcaaatataagctattataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (11)   
   Pfam (11)   
All databases (38)   

Download RDF
DBGET integrated database retrieval system