KEGG   Sarcophilus harrisii (Tasmanian devil): 100922167
Entry
100922167         CDS       T02286                                 
Name
(RefSeq) protocadherin beta-16-like
  KO
K16494  protocadherin beta
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:shr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:shr04515]
    100922167
Cell adhesion molecules [BR:shr04515]
 Cadherins
  Protocadherins
   100922167
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_3
Other DBs
NCBI-GeneID: 100922167
NCBI-ProteinID: XP_003756713
Ensembl: ENSSHAG00000008675
Position
2:374031265..374034312
AA seq 792 aa
MTLKRKAILRQRQVLFLVFLLWVSEASCELGRFLVAEETEKGSFVANVATVLGLELGNLS
ARGARISSRGNKQILQLRGENGDLVLKDKLDREELCGSAEPCLLPFQILLENPFKIFRAE
LLVGDINDHSPVFLEPEMLLKIPENSIPGTVLPLKNAEDLDVGSNAVQNYTISPNSHFHV
QTHSRSEGRKFPELVLIKTLDREEQPEFTLILTAIDGGSPPRSGTTRVRIAVLDINDNAP
IFTQPQYEVRIPENNSIGSLVVTISAEDLDTGKNAEILYSLFHSSEEIIKTFEVNPISGD
IRLRKKLDFETIQRYEVDIEGTDGGGLSGKCTVIVHVIDLNDNAPELTMSSLTNPIPENA
PETVVAVFSISDLDSGENGRLVCSIQEDIPFILQPSIENFYALVTEGALDRENKAQYNVM
ITVTDLGFPRLKSEYNITVFISDVNDNPPVFTQTEYTLYLKENNSPAFHLGSVSANDRDS
GTNAKVTYSLQPPGLENFSLFSYISINSDNGHLYALRSLDYEIIPTFQFSVKATDGGLPA
LSSQVLVQVVVLDENDNSPLVLYPLQNGTVSYNDLVPRAAEPGYLVTKVVAVDEDSGQNS
WLSYQLLKATDPGLFTVWSHNGEVRTVRPISDRDAIKQKLLVLVKDNGQPPLSTAVTLNV
LLVDGFSEPYIKLPGSSKEPAQTDSLTLYLVISLASISFLFLFFIIVFTVLHLWRRKRDS
SDSSHFESNGPFPGHLVDASGTGTLSHSYQYEACLNSGSGTSEFKFLKPIIPSLPAHNDG
KDLEERNNLDFN
NT seq 2379 nt   +upstreamnt  +downstreamnt
atgactctcaaaaggaaagcaattctacggcaaaggcaagttctatttcttgtttttttg
ctgtgggtgtcagaagccagttgcgagctggggaggtttttggtggcggaggaaactgag
aaaggctcttttgtggcaaatgtagcaacggtcttggggttagagttaggaaatctgtca
gccagaggggcccgaatatcttctagaggaaataagcagattttgcagctcaggggtgag
aatggagatttggtcctaaaagacaaactggaccgggaggagctgtgcggctccgctgag
ccctgtctgctgcctttccagattttactggaaaaccctttcaagatatttcgggctgag
cttctggtaggagacattaatgaccattcgcccgtgttcctagaaccagaaatgctcctg
aaaatcccggaaaatagtattcctggtactgttttgcctctgaaaaatgctgaagatttg
gatgtaggaagtaacgcagtgcagaattatactatcagccctaattcccatttccacgtt
caaactcacagtcgtagtgagggcaggaagttcccagagctggtgttgatcaaaactctg
gatcgtgaggagcagccggaattcacattaatcctcacagccatagatggtgggtccccg
cccaggtctggaacgactcgcgttcgcatagcagttttggacattaatgataatgctccc
atatttactcaacctcaatatgaggttcggatccctgaaaacaattccatcggttcgttg
gtcgtcaccatctctgctgaagacttggacactggaaaaaacgcagaaatactgtattcc
ctttttcatagttctgaggaaattatcaaaacttttgaagtaaatcccatctcaggagat
attcgactcagaaaaaaactagattttgagacaattcaacggtatgaagtagatattgaa
ggaactgatggtggtggcctttccggaaaatgcactgtcattgttcatgtgatagatctg
aacgacaatgctccagaactgaccatgtcatcacttaccaatcctatcccagagaatgca
cctgagactgtggtggctgttttcagtatttccgatttggactcaggagaaaacggaagg
ctggtttgctccattcaagaagacatcccctttattttgcaaccttccatagaaaatttt
tatgccttagtaacagaaggagccctggacagagagaataaggcccaatataatgttatg
attactgtcacggatttggggttcccgaggctcaaatcagaatataacatcacagtgttt
atctctgacgttaatgacaacccaccagtatttactcaaacagaatatactctctatctc
aaggagaacaacagtcctgccttccatcttggcagtgtcagtgccaatgacagggactca
gggactaatgccaaagtcacctattctttgcagcctccagggcttgagaatttctccctc
ttttcctacatctccattaattcagacaacggacatctctatgctctgagatctctggat
tatgaaatcatcccaactttccagttctctgtaaaggcaactgatggaggcttgccagcc
ctgagcagtcaggttctagttcaggttgtggtcttagatgagaatgacaactctccctta
gtgctatatccactgcagaatggcacagtatcctataatgacctggtgccaagggcagca
gaaccaggttacttagtcaccaaagtggtggctgtggatgaagactcaggccaaaattcc
tggctttcctaccagcttctcaaagccacagatccaggactcttcactgtgtggtcccat
aatggagaagtacgaacagtgaggcccatcagtgacagagatgccatcaagcagaagctt
ctggttctggtgaaggacaatgggcaaccacctctgtccacagcagtcacgctgaatgta
ctcctggtggatggattctctgagccatatataaagctcccaggatcttccaaggagcca
gcacagactgattctcttactctctacttggtcatttctttagcttctatctcttttctc
ttcttattttttatcattgtgttcactgtgctgcacctatggaggaggaaaagagattct
tcagacagcagccactttgagtccaatggtcccttcccaggccatttggtggatgccagt
ggcactgggaccttgtcccatagctaccaatatgaagcatgtcttaacagtggttctggg
actagtgaatttaagttcttgaagccaattattcccagtctccctgctcacaatgatgga
aaggatttggaggaaaggaataatttagacttcaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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