KEGG   Sarcophilus harrisii (Tasmanian devil): 100930580
Entry
100930580         CDS       T02286                                 
Symbol
LFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
  KO
K05948  fringe [EC:2.4.1.222]
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr00514  Other types of O-glycan biosynthesis
shr04330  Notch signaling pathway
shr05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:shr00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00514 Other types of O-glycan biosynthesis
    100930580 (LFNG)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    100930580 (LFNG)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    100930580 (LFNG)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:shr01003]
    100930580 (LFNG)
Enzymes [BR:shr01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.222  O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
     100930580 (LFNG)
Glycosyltransferases [BR:shr01003]
 Glycan extension
  O-Glycan
   100930580 (LFNG)
SSDB
Motif
Pfam: Fringe Galactosyl_T
Other DBs
NCBI-GeneID: 100930580
NCBI-ProteinID: XP_031797054
Ensembl: ENSSHAG00000012405
Position
1:complement(260350500..260377250)
AA seq 400 aa
MLKGCGRRLLLSLVGALLACLLVLTVDQRQQLRQRLPQPPAAEELPGGEVGRRALQSLAG
PSEPQRQGPPPPPQPQEEPAASRAGASGPSGDVRSFSEYFGQLSRARRDVGPLPGVAPVR
DSVPRPQMEQLFPRDVFIAVKTTKKFHRSRLDLLMDTWISRNKEMTFIFTDGEDEVLKQH
TGNVINTNCSAAHSRQALSCKMAVEYDKFIESGRKWFCHVDDDNYVNVPMLVKLLSSYPH
TQDVYIGKPSLDRPIQATERISENKMRPVHFWFATGGAGFCISRGLALKMSPWASGGHFM
NTAEKIRLPDDCTIGYIIESVLGVRLIRSNLFHSHLENLQQVPKSELHKQVTLSYGMFEN
KRNSIHMKGAFSVEADPSRFRSIHCLLYPDTPWCPRNVVY
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgcttaaaggctgcggccgccgcctgctcctgtccttagttggagccctgctcgcttgc
ctcttggtgttgacggtggatcagaggcagcagctgcgacagcggttgccgcagccgccg
gcggcggaggaactcccggggggcgaggtaggacgtcgagctctgcagagtctggctggt
cccagcgaaccccagaggcagggaccaccgcccccgccgcagccccaggaggagcccgct
gcctcgcgggctggggcgtctggtccctccggggatgtccgcagcttctcggagtatttc
ggccagctgagtcgagctagaagggacgtggggccccttcctggggtagccccggtgcgc
gacagcgtccccaggccccagatggagcagctctttcctagagacgtcttcattgcagtc
aagaccaccaagaagtttcacagatcccgcctggacctgcttatggacacctggatctcc
aggaataaagagatgactttcatctttacagatggggaagatgaagtactgaagcaacat
acaggcaatgtcatcaataccaactgttctgcggcccatagccgccaggctttatcctgc
aagatggccgtggaatatgacaagttcattgagtcaggaaggaagtggttctgccacgtg
gatgatgacaattatgtcaacgttccaatgcttgtcaagctgctatccagctaccctcac
actcaagatgtctacattggcaagcccagtttggatcgacccatccaagccacagagagg
atcagtgagaacaagatgcgtcctgttcacttctggttcgcaactggtggggctggtttc
tgtatcagccgtggactggccttgaagatgagtccctgggcaagtgggggccacttcatg
aacacagcagagaagatccgactgcctgacgattgtaccattggctacatcattgaatct
gtgttgggtgtgaggctcattcgaagcaacctgttccattcccacctggaaaatcttcaa
caggtgcccaagtcagagctccataaacaggtaacactgagctatggaatgtttgaaaac
aagaggaattccattcatatgaaaggtgcattctctgtggaggctgatccatccaggttc
cgctctatccactgcttgctatacccggatactccgtggtgtcctcgtaatgtggtctac
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system