KEGG   Stereum hirsutum: STEHIDRAFT_154278
Entry
STEHIDRAFT_154278 CDS       T03127                                 
Name
(RefSeq) hypothetical protein
  KO
K02328  DNA polymerase delta subunit 2
Organism
shs  Stereum hirsutum
Pathway
shs03030  DNA replication
shs03410  Base excision repair
shs03420  Nucleotide excision repair
shs03430  Mismatch repair
shs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:shs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    STEHIDRAFT_154278
   03410 Base excision repair
    STEHIDRAFT_154278
   03420 Nucleotide excision repair
    STEHIDRAFT_154278
   03430 Mismatch repair
    STEHIDRAFT_154278
   03440 Homologous recombination
    STEHIDRAFT_154278
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shs03032]
    STEHIDRAFT_154278
   03400 DNA repair and recombination proteins [BR:shs03400]
    STEHIDRAFT_154278
DNA replication proteins [BR:shs03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    STEHIDRAFT_154278
DNA repair and recombination proteins [BR:shs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      STEHIDRAFT_154278
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     STEHIDRAFT_154278
SSDB
Motif
Pfam: DNA_pol_D_N DNA_pol_E_B
Other DBs
NCBI-GeneID: 18800616
NCBI-ProteinID: XP_007301395
JGI: Stehi1_154278
Position
Unknown
AA seq 519 aa
MTRVDQIAGPSTAHSRLPTSVLPLVEATPSFTIDAANKSFKHQYANIYFIRLKLLREHVE
REAERKWREVSGSPVLVPRVLEVVRGQLCFVVGTVYMEMPLKANVLEDVGRDHSIPAPPP
RDKIYSADDHVTLEDESGRIQLVGEKIERERLVTGVILGALGYENANGDFQVVDVCYAGM
ASQAAHPEHMDGMDVDDTPVVTDSSSKTVQQEEYVAFVSGLDIGSPTPSDAQIQMLVEYL
TGEAGGLDDQVSASQISRLVILGNSLSDAVNAQIAAEDSPKDKDKKGKRYGYDNASFSPH
PTINLSGHLHDLARTLPIHLLPGASDPSGTILPQQPLPRMMFGPAAAFSSFTCETNPTYI
RLSPGKPQEQENIPPSAPSPAKKSDSWARTILATSGQPLDDMFKYVPSPPATRLGLAEST
LRWRHMAPTAPDTLWCHPFFTKDPFILSQTPDVYAIGCQPKFSTKLVKDDERRCRIVLVP
NFAETGVLVLVGMRRLDAKIVKFSVDEEDMDVGEMEADV
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgacccgtgttgaccagattgctggtccttcgactgctcactctcgattgcccacctct
gtccttccgctcgttgaggccactccttcattcaccatcgatgccgccaataagtcgttc
aaacatcaatatgcaaacatctattttattcgtctaaaactactgagggaacacgttgag
agagaggctgagcgcaaatggagagaagttagcgggtcacccgtacttgttcccagagtt
cttgaagttgtgcggggccagctttgctttgtcgtgggaacagtgtatatggagatgccc
ctaaaagctaatgtgttggaggacgtcggcagagaccactcaattcctgccccaccacct
cgagacaagatctactcggctgatgaccatgtcactctggaagacgaatctggacgaatc
cagctcgtcggtgagaagatcgagagagaacgacttgtgactggtgtcatccttggtgcc
ctaggctatgaaaatgcgaatggagacttccaggtggtggatgtgtgctatgccggaatg
gcttcgcaagcagcacaccctgaacatatggatgggatggacgtggacgacacgcccgtg
gtgactgactcatcatcaaaaacggtacaacaagaagaatatgttgccttcgtttcaggt
ctcgatattggatcgcccactccctcggatgcccaaattcagatgttggtcgagtacctg
acaggtgaagcaggagggttggatgatcaagtctctgcttcccaaatatcgcgactcgtg
attcttgggaactctctttcagacgcagtcaatgcgcagatcgcggcggaagatagcccc
aaggacaaagacaagaagggaaaacggtatggctacgataacgcgtctttctctcctcat
ccgacaatcaatctctctggccacctccatgaccttgcgcggaccttacctatacatctc
cttcccggcgcctccgatccttctgggaccatcttgccacaacaaccccttcctcgtatg
atgtttggtcccgcagcagcgttctcttcctttacctgcgagacgaaccctacgtacatc
cgtctctcgcctgggaagccacaggagcaagagaacataccgccgtcggcaccgtcaccc
gccaaaaagtcagattcgtgggcacgaacaatccttgcgacttcgggccaacctctagac
gacatgttcaagtacgtgcctagtccacctgctacgcggttagggttggccgagtccaca
ctccgatggcgacatatggctcctactgcgccggacacactatggtgccacccgttcttt
acgaaggacccgttcattctctcacagacacctgacgtctacgctatcggatgccagcca
aaattctcgacgaagctcgtgaaggatgatgagcggagatgtaggattgttctcgttccc
aatttcgcagagacgggtgtcctggttctagttggaatgaggcgactcgacgcgaaaatt
gttaagttttcggtcgacgaagaggacatggatgtgggagagatggaagccgatgtgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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