KEGG   Stereum hirsutum: STEHIDRAFT_171035
Entry
STEHIDRAFT_171035 CDS       T03127                                 
Name
(RefSeq) polysaccharide lyase family 4 protein
  KO
K18195  rhamnogalacturonan endolyase [EC:4.2.2.23]
Organism
shs  Stereum hirsutum
Brite
KEGG Orthology (KO) [BR:shs00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    STEHIDRAFT_171035
Enzymes [BR:shs01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.23  rhamnogalacturonan endolyase
     STEHIDRAFT_171035
SSDB
Motif
Pfam: RhgB_N CBM-like fn3_3
Other DBs
NCBI-GeneID: 18803796
NCBI-ProteinID: XP_007308075
JGI: Stehi1_171035
Position
Unknown
AA seq 529 aa
MLRSSLFLGLCALATLVSSVLGWTVTVSGNNYIVDTSGGLIFTVDHTTGDITSMLYNGIE
AQDQSGKHSQISSGIGATCTYEFTGNDDHYVVIACTTSTLVHYYVAKYKDPAIHMVTYTT
AEPSVGELRYIFRLNSATLPNGYTQSAICDDAIEGSDVFYCDGQTRSKFYSSQRFIYDKV
HGVTGSNIGAYIILSQYAYEKSSGGPFFRDINNQHGDQNELYFFQNSGHVQTEAYRQGLH
GPYTLYFTTGAVPSTDIDLTFWEGLGISAYTPLASRGYVSGKAIGIDLTSFNATVAFNNS
ANQYWVQADSSTGNFYTTGMIPGTYAMILYKNELAVAESSVTVTAGSTTSKNIDSAEDAP
STVIWQIGDFDGQPRGFLNADMIETMHPSDSRMHDWVRTYTVGQEDIGYFPMAIFKDVGV
VTIRFALASGQGGARTLDIGTTWSFAGGRPQVTVNGWTGPTPAAPTNLDSRGVTRGTWRG
NNVLYTVDIPDGTLYTGSTVNVITINVVSGSSGDTYLSPNIVFDAIRLY
NT seq 1590 nt   +upstreamnt  +downstreamnt
atgcttcgttcttccctttttctcggcctttgcgccttggccactttggtctcttcggtt
ttgggctggacggtcaccgtgtctggtaacaactacattgttgatacatctggtggactt
atttttactgtggaccacactaccggcgacattactagcatgctgtacaacggaattgag
gctcaagaccagagcggcaagcacagccaaatttcgtcaggcattggcgcgacctgcaca
tacgaattcactggcaatgatgaccactacgtcgtcatcgcctgcacgacgtcgaccttg
gtgcactactatgtggcgaaatacaaggatccagccatccatatggtcacttatacgacg
gcagagccaagtgttggcgagctgcgctacatcttccgcctgaattctgcgaccctgccc
aacgggtatactcagtctgcgatctgcgacgatgccatcgagggctccgatgtgttttac
tgcgatggacagacgcgttcgaagttctactcttcccagcgattcatctatgacaaggtt
cacggagttacaggtagcaatatcggtgcatacataatcctctctcaatatgcttatgag
aagtccagtggtggccccttcttccgcgacattaacaaccaacacggtgatcaaaacgag
ctctacttcttccagaattctggtcatgttcagaccgaagcttaccgccagggcctgcac
ggcccctacactctttactttaccacaggagccgttccctccactgacattgacctcact
ttctgggagggtctcggtatctctgcatatacccctcttgcgtctcgcggatacgtctca
gggaaggccatcggtattgacttgacaagcttcaacgccactgttgcgttcaacaactcg
gcaaaccaatactgggttcaagcagacagcagcactggcaacttttatacgactggcatg
attccgggaacatatgcgatgattctttacaaaaacgagctagccgttgcagagtcttcg
gtgaccgtcacggcaggcagtacaacctccaagaacatcgactcggcagaggatgctcca
tctactgtcatctggcaaataggggactttgacgggcagccaaggggattcttgaacgcc
gacatgatcgaaacgatgcaccctagcgattctcgtatgcacgattgggtgcgaacctac
acggttggtcaagaggacatagggtacttccccatggccatcttcaaggacgttggggtg
gtgaccattcgatttgctttggcttctggccaaggaggtgctcgtaccctggatatcgga
acgacctggtcctttgctggtggacgcccccaagtaaccgttaatggttggactggtccg
actcctgctgctcctacgaatcttgatagccgtggtgtaacgcgcggcacctggagaggc
aacaacgtactgtataccgtcgacattccggacggtactttgtatactggctccacagtg
aacgtcataacgatcaacgttgtctctgggtcctctggcgacacttacctgtcaccgaac
atcgtcttcgatgccattcgactttactaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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